Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K10
         (336 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.21 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.28 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.0  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   2.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   3.5  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   3.5  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 61  CARAQATGQPLPAHVFTHVNGKP---TNISGRGGRRH 162
           C+   +    L AHV  H N KP       GR  RRH
Sbjct: 224 CSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRH 260


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 157 RHVISWMDAPDELYFRATDSAKAARRTLSCGELRRGARAPWRTMC 291
           +++I  +D   E +     SAK     L+C +LRR  R  + ++C
Sbjct: 187 KNLICEIDGRHEFFLAEFKSAKTPPNKLNCYDLRR-VRKNYNSIC 230


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 288 VCRSACRTREGGGCGR 335
           VC  +  TR   GCGR
Sbjct: 921 VCAGSTGTRRATGCGR 936


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 31  RPSREQYAAMCARAQATGQPLPAHVFTHVNGKP--TNISGRGGRR 159
           +P R+     C R       L  H  TH + +P   +I G+  RR
Sbjct: 75  KPKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRR 119


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 213 QRQGGEADAQLWGVAARGA 269
           QR   EA  QLW    RGA
Sbjct: 103 QRSDEEAQIQLWIKQIRGA 121


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 213 QRQGGEADAQLWGVAARGA 269
           QR   EA  QLW    RGA
Sbjct: 103 QRSDEEAQIQLWIKQIRGA 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,961
Number of Sequences: 336
Number of extensions: 1346
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)