Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K09
         (410 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EEY1 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_A0E668 Cluster: Chromosome undetermined scaffold_8, who...    32   4.0  
UniRef50_UPI0000DB6B5C Cluster: PREDICTED: similar to glutamate-...    31   6.9  
UniRef50_UPI00005A332A Cluster: PREDICTED: similar to Profilin-4...    31   6.9  
UniRef50_A6TNZ2 Cluster: Binding-protein-dependent transport sys...    31   6.9  
UniRef50_A1ZV57 Cluster: Stage II sporulation protein E; n=1; Mi...    31   6.9  
UniRef50_Q9G4C9 Cluster: SecY-independent transporter protein; n...    31   6.9  
UniRef50_Q8I309 Cluster: Met-10+ like protein, putative; n=3; Pl...    31   9.1  

>UniRef50_A2EEY1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 745

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +3

Query: 105 RIITRKNRLELFLHKGAPNAILLIENDYNCHQXXXXXXXXIVIQKDINLM-PVKITVKYE 281
           ++I++  +L L    G P+ I ++ N     Q        I+  K ++LM    +T+K E
Sbjct: 299 KVISKLEKLYLESADGMPHPIKIVSNPGIVWQNSIEKQF-ILKDKPVSLMFDESVTLKIE 357

Query: 282 KYKFDADLQRYKLDEISKNSNIEVTESVSMT 374
            Y  + DLQ Y   E++ N N ++ E  S T
Sbjct: 358 IY--EPDLQSYSNLEVNINGNPQIIEQGSTT 386


>UniRef50_A0E668 Cluster: Chromosome undetermined scaffold_8, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_8,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 125

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
 Frame = -2

Query: 382 VFQVIETLSVTSM-FEFLLISSNLYLCKSASNLYFSY--FTVIFTGIKLISFWITI*SNF 212
           ++Q+I+T+    M F ++L  + ++L K A+     Y  F V F  + ++S  +T  S F
Sbjct: 6   IYQLIKTIIPQFMGFNYILQVNKVHLHKEATETLQPYPCFFVSFNNLSVLS--LTTSSLF 63

Query: 211 FNNYWWQL*SFSINKI 164
           F N++  +   S+NK+
Sbjct: 64  FQNFYVTVDELSLNKL 79


>UniRef50_UPI0000DB6B5C Cluster: PREDICTED: similar to
           glutamate-cysteine ligase, modifier subunit; n=2;
           Apocrita|Rep: PREDICTED: similar to glutamate-cysteine
           ligase, modifier subunit - Apis mellifera
          Length = 283

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 237 KDINLMPVKITVKYEKYKFDADLQRYKLDEISKNSNIEVTESV 365
           KDIN   VKITVK      D +L +  +D++  + NI   ES+
Sbjct: 61  KDINREDVKITVKVFISSPDVNLLKEAIDQVCNSLNINAIESL 103


>UniRef50_UPI00005A332A Cluster: PREDICTED: similar to Profilin-4
           (Profilin IV); n=2; Canis lupus familiaris|Rep:
           PREDICTED: similar to Profilin-4 (Profilin IV) - Canis
           familiaris
          Length = 217

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 110 DSLCSCVSYVFGLIFKNLVPHFNHIKNFL 24
           D +  C S VFG I   L  H +H++N L
Sbjct: 63  DCISGCTSQVFGFIISELREHMSHLQNLL 91


>UniRef50_A6TNZ2 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=6; Firmicutes|Rep:
           Binding-protein-dependent transport systems inner
           membrane component - Alkaliphilus metalliredigens QYMF
          Length = 297

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -2

Query: 382 VFQVIETLSVTSMFEFLLISSNLYLCKSASNLYFSYFTVIFTGIKLISFWI 230
           VF V+ T  + ++F   L++S + L K   N+YF  F      I ++  WI
Sbjct: 79  VFGVVPTSMILALFFAALLNSKVRLKKFFRNIYFLPFVTSTVAISMVWRWI 129


>UniRef50_A1ZV57 Cluster: Stage II sporulation protein E; n=1;
           Microscilla marina ATCC 23134|Rep: Stage II sporulation
           protein E - Microscilla marina ATCC 23134
          Length = 744

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
 Frame = -2

Query: 340 EFLLISSNLYLC-KSASNL--YF---SYFTVIFTGIKLISFWITI*SNFFNNYWWQ 191
           + LL++ +LYL  KS + L  YF   S+F ++  G+ L+SF+  I  NF  NY+ Q
Sbjct: 334 DLLLMAISLYLLFKSKNTLARYFIIGSFFLMLGWGLSLVSFFKVIQVNFNENYFSQ 389


>UniRef50_Q9G4C9 Cluster: SecY-independent transporter protein; n=1;
           Thraustochytrium aureum|Rep: SecY-independent
           transporter protein - Thraustochytrium aureum
          Length = 248

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 400 PHI*CEVFQVIETLSVTSMFEFLLISSNLYLCKSASNLYFSYFTVIFTGIKLISFW 233
           P+   ++F  I  +  +S+F F    + L  C  A  L+F YF +I  G K   F+
Sbjct: 80  PYFFIQIFFFILPILYSSLFWFYFSLTFLNFCIQAIFLFFVYFLIIPNGYKFFLFY 135


>UniRef50_Q8I309 Cluster: Met-10+ like protein, putative; n=3;
           Plasmodium|Rep: Met-10+ like protein, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 762

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 246 NLMPVKITVKYEKYKFDADLQRYKLDEISKN 338
           NL  VK  VKYEK+ +   L +YK+++I KN
Sbjct: 46  NLDDVKEKVKYEKHTYCLLLDKYKVNKILKN 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,630,222
Number of Sequences: 1657284
Number of extensions: 5889659
Number of successful extensions: 12728
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12725
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)