Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K09
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.67 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   0.67 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.67 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 113 YDSLCSCVSYVFGLIF 66
           + SL SC S +FG IF
Sbjct: 95  FSSLLSCCSVIFGCIF 110


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -2

Query: 382 VFQVIETLSVTSMFEFLLISSNLYLCKSASNLY--FSYFTVIFTGIKLISF 236
           +F  +  L V   F  + +   ++  ++   LY  FSY  ++ TGI  I F
Sbjct: 124 IFVNLAILGVFGEFVLVFVPDYVFFVENEPILYLIFSYCPIVTTGIIKIQF 174


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 113 YDSLCSCVSYVFGLIF 66
           + SL SC S +FG IF
Sbjct: 95  FSSLLSCCSVIFGCIF 110


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 388 CEVFQVIETLSVTSMFEFLLISSNL 314
           CE     E L VT M+E LLI  +L
Sbjct: 486 CERLARTEKLFVTPMYEGLLIDQSL 510



 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 294 DADLQRYKLDEISKNSNIEVTESVS 368
           +AD++   LDEI K    E  E++S
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETIS 543



 Score = 21.4 bits (43), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -2

Query: 334 LLISSNLYLCKSASNLYFSYFTVIF-------TGIKLISFWI 230
           L  SS +   KS+    FS+F ++F        GI L+ F+I
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 388 CEVFQVIETLSVTSMFEFLLISSNL 314
           CE     E L VT M+E LLI  +L
Sbjct: 486 CERLARTEKLFVTPMYEGLLIDQSL 510



 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 294 DADLQRYKLDEISKNSNIEVTESVS 368
           +AD++   LDEI K    E  E++S
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETIS 543



 Score = 21.4 bits (43), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -2

Query: 334 LLISSNLYLCKSASNLYFSYFTVIF-------TGIKLISFWI 230
           L  SS +   KS+    FS+F ++F        GI L+ F+I
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 388 CEVFQVIETLSVTSMFEFLLISSNL 314
           CE     E L VT M+E LLI  +L
Sbjct: 486 CERLARTEKLFVTPMYEGLLIDQSL 510



 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 294 DADLQRYKLDEISKNSNIEVTESVS 368
           +AD++   LDEI K    E  E++S
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETIS 543



 Score = 21.4 bits (43), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -2

Query: 334 LLISSNLYLCKSASNLYFSYFTVIF-------TGIKLISFWI 230
           L  SS +   KS+    FS+F ++F        GI L+ F+I
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 388 CEVFQVIETLSVTSMFEFLLISSNL 314
           CE     E L VT M+E LLI  +L
Sbjct: 486 CERLARTEKLFVTPMYEGLLIDQSL 510



 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 294 DADLQRYKLDEISKNSNIEVTESVS 368
           +AD++   LDEI K    E  E++S
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETIS 543



 Score = 21.4 bits (43), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -2

Query: 334 LLISSNLYLCKSASNLYFSYFTVIF-------TGIKLISFWI 230
           L  SS +   KS+    FS+F ++F        GI L+ F+I
Sbjct: 147 LFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 237 FGSQFKVIFLIIIGGSYSHFLS 172
           F   F + FL+II  S  HF++
Sbjct: 196 FNDIFGISFLLIISYSTLHFVN 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,810
Number of Sequences: 336
Number of extensions: 1842
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)