Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K09
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    25   0.81 
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    25   0.81 
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    22   7.6  

>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 75  SEHVRDARTQRIITRKNRLELFL 143
           +EH+ ++RT  I+ R NR+ + L
Sbjct: 84  TEHIEESRTLEILKRLNRIVMIL 106


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 75  SEHVRDARTQRIITRKNRLELFL 143
           +EH+ ++RT  I+ R NR+ + L
Sbjct: 84  TEHIEESRTLEILKRLNRIVMIL 106


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = -2

Query: 373 VIETLSVTSMFEFLLISSNLYLCKSASNLY 284
           +  + ++  +FE ++ ++ LY C+S  + Y
Sbjct: 5   ITSSCAIAKVFELVIYNNLLYACRSYLSPY 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,000
Number of Sequences: 2352
Number of extensions: 6459
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)