Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K09
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro...    27   7.3  
AE014298-2167|AAF48467.2| 1208|Drosophila melanogaster CG33206-P...    27   7.3  
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P...    27   7.3  
AY058257-1|AAL13486.1|  465|Drosophila melanogaster GH01515p pro...    27   9.7  
AF181686-1|AAD54422.1|  465|Drosophila melanogaster membrane pro...    27   9.7  
AE014296-2737|AAF49464.2|  465|Drosophila melanogaster CG4672-PA...    27   9.7  

>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p
           protein.
          Length = 1398

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +3

Query: 225 IVIQKDINLMPVKITVKYEKYKFDADLQRYKL--DEISKNSNIEVTE 359
           +V Q+ +++   ++  ++EK   +AD+ +Y L  DE+ KN+++ + E
Sbjct: 538 LVEQRLVDVQNQQLVSEHEKKTLEADISQYILQCDELMKNNDLLLNE 584


>AE014298-2167|AAF48467.2| 1208|Drosophila melanogaster CG33206-PB,
           isoform B protein.
          Length = 1208

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +3

Query: 225 IVIQKDINLMPVKITVKYEKYKFDADLQRYKL--DEISKNSNIEVTE 359
           +V Q+ +++   ++  ++EK   +AD+ +Y L  DE+ KN+++ + E
Sbjct: 348 LVEQRLVDVQNQQLVSEHEKKTLEADISQYILQCDELMKNNDLLLNE 394


>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
           isoform A protein.
          Length = 1398

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +3

Query: 225 IVIQKDINLMPVKITVKYEKYKFDADLQRYKL--DEISKNSNIEVTE 359
           +V Q+ +++   ++  ++EK   +AD+ +Y L  DE+ KN+++ + E
Sbjct: 538 LVEQRLVDVQNQQLVSEHEKKTLEADISQYILQCDELMKNNDLLLNE 584


>AY058257-1|AAL13486.1|  465|Drosophila melanogaster GH01515p
           protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = -2

Query: 367 ETLSVT---SMFEFLLISSNLYLCKSASNLYFSYFTV-IFTGIKLISFWITI*SNFFN-- 206
           ET  VT   SMF  + + ++LY+  + +N Y  +  + +F G +  S W+ I S++    
Sbjct: 389 ETEGVTYSWSMFHLVFVCASLYVMMTLTNWYKPHSEIELFNGNE-ASMWVKIVSSWLGVF 447

Query: 205 NYWWQL 188
            Y W L
Sbjct: 448 IYGWSL 453


>AF181686-1|AAD54422.1|  465|Drosophila melanogaster membrane
           protein TMS1d protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = -2

Query: 367 ETLSVT---SMFEFLLISSNLYLCKSASNLYFSYFTV-IFTGIKLISFWITI*SNFFN-- 206
           ET  VT   SMF  + + ++LY+  + +N Y  +  + +F G +  S W+ I S++    
Sbjct: 389 ETEGVTYSWSMFHLVFVCASLYVMMTLTNWYKPHSEIELFNGNE-ASMWVKIVSSWLGVF 447

Query: 205 NYWWQL 188
            Y W L
Sbjct: 448 IYGWSL 453


>AE014296-2737|AAF49464.2|  465|Drosophila melanogaster CG4672-PA
           protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = -2

Query: 367 ETLSVT---SMFEFLLISSNLYLCKSASNLYFSYFTV-IFTGIKLISFWITI*SNFFN-- 206
           ET  VT   SMF  + + ++LY+  + +N Y  +  + +F G +  S W+ I S++    
Sbjct: 389 ETEGVTYSWSMFHLVFVCASLYVMMTLTNWYKPHSEIELFNGNE-ASMWVKIVSSWLGVF 447

Query: 205 NYWWQL 188
            Y W L
Sbjct: 448 IYGWSL 453


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,015,006
Number of Sequences: 53049
Number of extensions: 264589
Number of successful extensions: 610
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)