Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K08
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.42 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   3.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   5.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   5.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   5.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   5.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   5.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 236 DGLTSQDQP*TPESEDGAPR 295
           DG + Q+QP +PES    PR
Sbjct: 413 DGGSGQNQPESPESSSSTPR 432


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 68  GQGGGATNDEEED 30
           GQG    NDE++D
Sbjct: 189 GQGSSTNNDEDDD 201


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 68  GQGGGATNDEEED 30
           GQG    NDE++D
Sbjct: 189 GQGSSTNNDEDDD 201


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 68  GQGGGATNDEEED 30
           GQG    NDE++D
Sbjct: 189 GQGSSTNNDEDDD 201


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 AAERRLQREVNVLAGVQADDERR 176
           A  RR   E+  + G+Q  DER+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDERK 248


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 AAERRLQREVNVLAGVQADDERR 176
           A  RR   E+  + G+Q  DER+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDERK 248


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 AAERRLQREVNVLAGVQADDERR 176
           A  RR   E+  + G+Q  DER+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDERK 248


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 AAERRLQREVNVLAGVQADDERR 176
           A  RR   E+  + G+Q  DER+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDERK 248


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 AAERRLQREVNVLAGVQADDERR 176
           A  RR   E+  + G+Q  DER+
Sbjct: 225 ARSRRYTTELGQVLGLQTTDERK 247


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 107 GRPGRVKRKNLRKGQGGGATNDEEED*TN 21
           G PG     ++  G+G G    EE+D TN
Sbjct: 150 GSPGDASNASIGSGEGTG----EEDDDTN 174


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 107 GRPGRVKRKNLRKGQGGGATNDEEED*TN 21
           G PG     ++  G+G G    EE+D TN
Sbjct: 306 GSPGDASNASIGSGEGTG----EEDDDTN 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,350
Number of Sequences: 336
Number of extensions: 2050
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)