Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K08
(538 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 292 5e-79
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 287 2e-77
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 279 4e-75
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 172 8e-43
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 98 2e-20
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 48 3e-05
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 48 3e-05
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 48 3e-05
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 48 3e-05
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 48 3e-05
BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interactin... 31 2.6
BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interactin... 31 2.6
AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interactin... 31 2.6
AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein pr... 31 2.6
AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens ... 31 2.6
AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein pr... 31 2.6
AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein. 31 2.6
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 292 bits (717), Expect = 5e-79
Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 287 bits (703), Expect = 2e-77
Identities = 141/170 (82%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFEGNA
Sbjct: 25 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRL 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGG-GATNDEEED 30
PSFIVRLDS KHIDFSL+SP G GRPGRVKRKN +KGQGG GA +DEEED
Sbjct: 145 PSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 279 bits (684), Expect = 4e-75
Identities = 134/169 (79%), Positives = 147/169 (86%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXX 357
LDQ+LK+I EYGLRNKREVWRVK+TLA+IRKAARELLTLD+KDP+RLFEGNA
Sbjct: 25 LDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNALLWRLVCI 84
Query: 356 XXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 177
LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNI
Sbjct: 85 GVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNI 144
Query: 176 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 30
PSFIVRLDS KHIDFSL SP+GGGRPGRVKRKN +KGQGG D +E+
Sbjct: 145 PSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQGGAGAGDHKEE 193
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 172 bits (418), Expect = 8e-43
Identities = 83/103 (80%), Positives = 90/103 (87%)
Frame = -3
Query: 413 KDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 234
+DP+RLFEGNA LDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 233 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 105
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/49 (89%), Positives = 49/49 (100%)
Frame = -3
Query: 536 LDQDLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFE 390
LDQ+LK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTLDEKDP+RLFE
Sbjct: 16 LDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 47.6 bits (108), Expect = 3e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = -3
Query: 527 DLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXXXXL 348
+L+++ Y L+ + + R +R+ AR L L E+D R+ +A L
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 347 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 168
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 167 IV 162
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 47.6 bits (108), Expect = 3e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = -3
Query: 527 DLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXXXXL 348
+L+++ Y L+ + + R +R+ AR L L E+D R+ +A L
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 347 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 168
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 167 IV 162
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 47.6 bits (108), Expect = 3e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = -3
Query: 527 DLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXXXXL 348
+L+++ Y L+ + + R +R+ AR L L E+D R+ +A L
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 347 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 168
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 167 IV 162
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 47.6 bits (108), Expect = 3e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = -3
Query: 527 DLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXXXXL 348
+L+++ Y L+ + + R +R+ AR L L E+D R+ +A L
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 347 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 168
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 167 IV 162
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 47.6 bits (108), Expect = 3e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = -3
Query: 527 DLKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLDEKDPKRLFEGNAXXXXXXXXXXL 348
+L+++ Y L+ + + R +R+ AR L L E+D R+ +A L
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 347 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 168
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 167 IV 162
+V
Sbjct: 149 LV 150
>BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 324 IQFHL 338
+ L
Sbjct: 511 QMYKL 515
>BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 324 IQFHL 338
+ L
Sbjct: 511 QMYKL 515
>AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interacting
protein 4 protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 324 IQFHL 338
+ L
Sbjct: 511 QMYKL 515
>AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein
protein.
Length = 296
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 110 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 169
Query: 324 IQFHL 338
+ L
Sbjct: 170 QMYKL 174
>AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ40105 fis, clone TESTI2006383. ).
Length = 535
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 349 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 408
Query: 324 IQFHL 338
+ L
Sbjct: 409 QMYKL 413
>AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 324 IQFHL 338
+ L
Sbjct: 483 QMYKL 487
>AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein.
Length = 609
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 162 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 323
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 324 IQFHL 338
+ L
Sbjct: 483 QMYKL 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,951,123
Number of Sequences: 237096
Number of extensions: 1444262
Number of successful extensions: 3985
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3976
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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