Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K07
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0992 - 33644712-33644726,33644769-33644822,33644915-336451... 106 7e-24
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 103 5e-23
05_05_0359 + 24393254-24393260,24393952-24394163,24394243-243942... 100 4e-22
04_04_1237 - 31991817-31992569,31993452-31993550,31994343-319949... 89 2e-18
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 31 0.30
09_02_0543 + 10427321-10428315,10428440-10429154 31 0.30
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 31 0.30
01_01_0671 - 5137787-5137843,5138420-5138503,5138595-5138662,513... 31 0.30
08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200... 31 0.52
07_03_0956 - 22869166-22871145,22871800-22871959,22872311-228723... 30 0.69
08_02_1172 + 24898290-24899141,24900864-24901328 30 0.91
10_08_0650 - 19591898-19593148 29 1.2
06_03_0219 - 18227559-18227858,18227864-18228340 29 1.2
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 29 1.6
01_01_0051 + 389051-389623 29 2.1
07_01_0028 + 217214-218239 28 2.8
12_02_1243 + 27300978-27301682 28 3.7
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 28 3.7
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 3.7
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 28 3.7
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 28 3.7
01_01_0381 - 2961422-2963917 28 3.7
08_02_1569 - 27924930-27925034,27925149-27925167,27925271-279254... 27 4.9
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 27 4.9
03_02_0861 - 11873026-11874009,11874140-11874180,11876050-11876314 27 4.9
02_05_0264 + 27263562-27264830 27 4.9
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 27 6.4
03_05_0834 - 28051067-28051381,28051675-28052120,28052330-280526... 27 6.4
01_06_1379 + 36801473-36801889 27 6.4
09_02_0107 + 4354470-4354589,4355058-4355156,4355292-4355596,435... 27 8.5
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470... 27 8.5
07_03_1364 + 26044559-26044672,26045732-26046334 27 8.5
06_03_0497 + 21424732-21424899,21424992-21425057,21425176-214256... 27 8.5
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 27 8.5
02_04_0555 - 23840634-23841035,23841388-23841501,23841742-238418... 27 8.5
>01_06_0992 -
33644712-33644726,33644769-33644822,33644915-33645126,
33645436-33645472
Length = 105
Score = 106 bits (255), Expect = 7e-24
Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Frame = +1
Query: 169 MSIQNLNTFDPFADAIKSSEDDVQDG---LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIV 339
+ +Q + FDPFA+A + + V G VHVRIQQRNGRK+LTTVQGL EY KI+
Sbjct: 4 LDVQLPSAFDPFAEA-NAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNKIL 62
Query: 340 RACKKEFACNGTVVEHPEYGEVLQLQGDQR 429
+ KKEF CNGTVV+ PE G+V+QLQGDQR
Sbjct: 63 KDLKKEFCCNGTVVQDPELGQVIQLQGDQR 92
>07_03_0685 - 20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 103 bits (248), Expect = 5e-23
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Frame = +1
Query: 154 STFNRMSIQNLNTFDPFADAIKSSEDDVQDG---LVHVRIQQRNGRKTLTTVQGLSSEYD 324
S + + IQ FDPFA+A + + G VHVRIQQRNGRK+LTTVQGL E+
Sbjct: 724 SFMSDLDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFS 782
Query: 325 LKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 429
KI++ KKEF CNGTVV+ PE G+V+QLQGDQR
Sbjct: 783 YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQR 817
>05_05_0359 +
24393254-24393260,24393952-24394163,24394243-24394296,
24394400-24394444
Length = 105
Score = 100 bits (240), Expect = 4e-22
Identities = 50/81 (61%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
Frame = +1
Query: 196 DPFADAIKSSEDDVQDGL---VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 366
DPFA+A + + G VHVRIQQRNGRK+LTTVQGL EY KI++ KKEF C
Sbjct: 3 DPFAEA-NAEDSGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCC 61
Query: 367 NGTVVEHPEYGEVLQLQGDQR 429
NGTVV+ PE G+V+QLQGDQR
Sbjct: 62 NGTVVQDPELGQVIQLQGDQR 82
>04_04_1237 -
31991817-31992569,31993452-31993550,31994343-31994976,
31995329-31995585
Length = 580
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +1
Query: 250 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 429
VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E CNG VVE E G+++QLQGD R
Sbjct: 498 VHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQGDHR 557
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 31.5 bits (68), Expect = 0.30
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -1
Query: 403 PRRTPGAPQRYRCTRTPS-CMPARSSSSHIPRTSPAPW-SMFYARSAAG--FGRALDHLA 236
PRRTP + +R RTPS R + PR +P+P R AAG GR D
Sbjct: 116 PRRTPSPGRDHRIRRTPSPYRDRRRIPDYHPRRTPSPHRDRDRDRHAAGRPRGRGDDDRD 175
Query: 235 RRPP 224
R PP
Sbjct: 176 RDPP 179
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 31.5 bits (68), Expect = 0.30
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 406 APRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAPW 293
AP+ +P P T P PA + S H P S APW
Sbjct: 51 APQSSPAPPPAPDMTPPPGPGPAAAPSPHSPSPSNAPW 88
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 31.5 bits (68), Expect = 0.30
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 427 AGRLAVAAPRRTPGAPQRYR-CTRTPSCMPARSSSSHIPR 311
A RLAV APR +P AP R R PS P + S PR
Sbjct: 6 ASRLAVPAPRTSPHAPGRRRPAAPLPSAPPRPRALSAAPR 45
>01_01_0671 -
5137787-5137843,5138420-5138503,5138595-5138662,
5138854-5138935,5139282-5139346,5139504-5139747
Length = 199
Score = 31.5 bits (68), Expect = 0.30
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 271 RNGRKTLTTVQGLSS-EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGD 423
RN RK +T V+GL L + K+FA +VV+ P E + +QGD
Sbjct: 115 RNKRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGD 166
>08_02_0665 +
19818500-19819013,19819169-19819260,19819435-19820056,
19820575-19820775,19821327-19821395,19821428-19821522,
19821608-19822153
Length = 712
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 427 AGRLAVAAPRRT-PGAPQRYRCTRTPSCMPARSSSSHIPRTSPAPWSM 287
A +A AP T P + C PSC+PA ++++ + SP P ++
Sbjct: 233 ASSIAPYAPSLTFPNSLSSLHCHTPPSCLPASATTTTMAAASPPPLAL 280
>07_03_0956 -
22869166-22871145,22871800-22871959,22872311-22872375,
22872464-22872529,22872634-22872691,22872834-22872925,
22873093-22873332
Length = 886
Score = 30.3 bits (65), Expect = 0.69
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 349 CMPARSSSSHIPRTSPAPWS---MFYARSAAGFGRALDHLARRP 227
C+P+ SSSS R +P PWS + R RA RRP
Sbjct: 13 CLPSSSSSSSACRAAPLPWSRGVVVGVRRRRTVARAARRRGRRP 56
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 29.9 bits (64), Expect = 0.91
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1
Query: 382 PQRYRCTRT---PSCMPARSSSSHIPRTSPAPWSMFY-ARSAAGFGRALDHLARRPPS 221
P Y CT P+ A ++++H+P P P++ Y G G H + PP+
Sbjct: 12 PYYYYCTSASSFPTAPAAAAAAAHLPPPLPPPYAALYPTAGGVGVGVGAHHHHQYPPA 69
>10_08_0650 - 19591898-19593148
Length = 416
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 415 AVAAPRRTPGAPQRYRCTRTP-SCMPARSSSSHIPR---TSPAPWSMFYARSAAGFGR 254
A A P +P R T S ARSSS+H R +SP W++F + +GF R
Sbjct: 351 AFALPASGAASPASSRIASTTWSDYAARSSSAHRGRLAVSSPCHWTIFLSPGHSGFHR 408
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -1
Query: 421 RLAVAAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAP 296
RLA+ PRR P P R R PS A ++SS + R + AP
Sbjct: 105 RLALRFPRRPPELPPR----RRPSRFSAPAASSRLSRLARAP 142
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -1
Query: 412 VAAPRRTPGA--PQRYRCTRTPSCMPARSSSSHIPRTSPAPWSMFYARSAAGFGRALDHL 239
+A R P A P + T PS P S +PR PA +Y GF + DH+
Sbjct: 1 MALALRCPAAASPSPAKSTFPPSSSPP---PSRLPRRPPASCRCYYYGDGGGFRKNYDHI 57
Query: 238 ARR 230
++
Sbjct: 58 PKQ 60
>01_01_0051 + 389051-389623
Length = 190
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 418 LAVAAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAPWSMFYARSAAGF 260
LA +R P P +Y+ S P+ SSS +S + S ++ RSA F
Sbjct: 137 LARRRQQRNPSPPPQYKKEARRSPSPSPPSSSSTSSSSSSSGSSWWTRSARSF 189
>07_01_0028 + 217214-218239
Length = 341
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 385 APQRYRC-TRTPSCMPARSSSS--HIPRTSPAPWSMFYARSA-AGFGRALDHLARR 230
+P+ YR T T C+ S S HIP T+P P + AR+ RA+ LA++
Sbjct: 110 SPESYRWGTPTAKCLEQLSWSEAYHIPMTTPRPSTSIRARAVIEEVSRAMYELAQK 165
>12_02_1243 + 27300978-27301682
Length = 234
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 400 RRTPGA--PQRYRCTRTPSCMPARSSSSHIPRTSPAPWSM 287
+ PGA P R R P+ P + ++H P +P PW M
Sbjct: 90 KNVPGADIPNRPAGQR-PATAPQANPNTHFPNANPNPWFM 128
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 145 QRASTFNR-MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTL--TTVQGLSS 315
Q AS +R + LN+ PF D +KS++D ++ L H R + N + TT GL++
Sbjct: 961 QTASDIHRYVRCTLLNSTKPFEDVVKSAQDSLR-WLCHKRFLEWNNETKIYSTTPLGLAA 1019
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 397 RTPGAPQRYRCTRTPSCMPARSSSSHIP-RTSPAPWSMFYARSAAGFGRALDHLARRPPS 221
RT P R + T S SS P R SP+P SM R ++ R+ A +PP+
Sbjct: 126 RTKSKPIRISGSSTVDNTQRSSRSSASPIRLSPSPRSMSRTRPSSAASRSSPPFALQPPT 185
>09_04_0163 -
15249816-15249920,15250032-15250163,15250463-15250629,
15251259-15251448,15252530-15252661,15253275-15253382,
15253513-15253608,15253702-15253809,15253917-15254089,
15255026-15255401,15255887-15256030,15256125-15256799,
15256917-15256982,15257082-15257249
Length = 879
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PPLHFGVRVNWSPVSGNTPPRVISDSYIVE--VRCIAAFH*NKEH 154
P L V+V WS +S + PR + D+Y++ + IA NKE+
Sbjct: 745 PILMDNVKVTWSSLSKSLSPRGVVDTYVLNAYAKKIANDQNNKEN 789
>06_03_0810 -
24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 427 AGRLAVAAPRRTPGAPQRYRCTRTPSCMPARSS 329
A A A PR PG P R PS + RSS
Sbjct: 10 AAAAAAAPPRLAPGLPLAAAAVRRPSSLARRSS 42
>01_01_0381 - 2961422-2963917
Length = 831
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 301 QGLSSEYDLKKIVRACKKEFAC-NGTVVEHPEYGEVLQL 414
Q L E DLK++ R CK C V+ P G+V+Q+
Sbjct: 751 QKLCGEADLKEVERVCKIGCWCIQEDEVDRPTMGQVVQI 789
>08_02_1569 -
27924930-27925034,27925149-27925167,27925271-27925490,
27925925-27925971,27926502-27927025
Length = 304
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 394 TPGAP--QRYRCTRTPSCMPARSSSSH 320
TP AP Y T TPS PA SSSS+
Sbjct: 15 TPSAPPASSYGYTTTPSAPPASSSSSY 41
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 428 RWSPCSCSTSPYSGCSTTVP 369
R C C SP + CSTT P
Sbjct: 738 RTCACGCPASPAAACSTTAP 757
>03_02_0861 - 11873026-11874009,11874140-11874180,11876050-11876314
Length = 429
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 60 HLSAETHRRALSVTVILLKCVVSQRFIETKSIYVQSYVHPESE 188
H+S E+ R S +V LKC + +RF+ KS + + + S+
Sbjct: 242 HISVESQRSPTS-SVRFLKCGLCERFLRQKSPWTSNRIVQNSD 283
>02_05_0264 + 27263562-27264830
Length = 422
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 16 LTVSAITFWCPRKLVTCQRK 75
L+V+A+TF+C LV C+R+
Sbjct: 71 LSVAALTFYCMMLLVACRRR 90
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 215 IASANGSNVFRFWMDIRLNVDAL 147
IA++N V R WMD++ NV+ L
Sbjct: 440 IAASNHMEVLRRWMDLQRNVNVL 462
>03_05_0834 - 28051067-28051381,28051675-28052120,28052330-28052671,
28053170-28053310,28053419-28053489,28053575-28053640,
28053874-28054017,28054149-28054207,28054246-28054369,
28054730-28054862,28055138-28055187,28055715-28055824,
28057355-28057436,28057536-28057705,28057812-28058498,
28058645-28058794,28058908-28059039,28059444-28059594,
28060253-28060344,28062478-28062585
Length = 1190
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 226 EDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC-NGTVVEHPEYGE 402
EDDV L HV+ QR G+ + LSS YD +++ + C + + P E
Sbjct: 1078 EDDVLL-LDHVKKLQREGQLGAIVDRNLSSNYDGQEVEMMIQIALLCTQASPEDRPSMSE 1136
Query: 403 VLQ-LQGD 423
V++ L+G+
Sbjct: 1137 VVRMLEGE 1144
>01_06_1379 + 36801473-36801889
Length = 138
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 430 RAGRLAVAAPRRTPGAPQRYRCTRTPSCMPARSSS 326
RA P T P +R+P C PAR+SS
Sbjct: 70 RASVARAFRPASTKKGPASCAASRSPDCTPARNSS 104
>09_02_0107 +
4354470-4354589,4355058-4355156,4355292-4355596,
4356101-4356278,4356368-4356481,4356543-4356674,
4356784-4356888
Length = 350
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 44 VRVNWSPVSGNTPPRVISDSYIVE--VRCIAAFH*NKEH 154
V+V WS +S + PR + D+Y++ + IA NKE+
Sbjct: 184 VKVTWSSLSKSLSPRGVVDTYVLNAYAKKIANDQNNKEN 222
>08_01_0541 +
4702930-4703328,4703411-4703506,4703601-4703649,
4703771-4703865
Length = 212
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 340 ARSSSSHIPRTSPAPWSMFYARSAAGFGRALDHLARRPPS 221
AR+ P+T P+P S+ S+ G A D L+ PS
Sbjct: 19 ARAKPKPKPKTKPSPASLLSGGSSPASGDAADDLSFLSPS 58
>07_03_1364 + 26044559-26044672,26045732-26046334
Length = 238
Score = 26.6 bits (56), Expect = 8.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 428 RWSPCSCSTSPYSGCSTTVPLHANSFLHARTIFFKSYSEDKP--CTVVNVLRP 276
+W+P CST+P+ C L N+F R + + SY E +P C + + L P
Sbjct: 38 QWAPSYCSTAPHE-CEYEPRLPPNNFT-IRGL-WPSYEEWRPEYCNISDRLDP 87
>06_03_0497 +
21424732-21424899,21424992-21425057,21425176-21425634,
21425945-21426088,21426172-21426306,21426418-21426808,
21427256-21427428,21427508-21427615,21427715-21427810,
21427896-21428003,21428644-21428792,21428924-21428925,
21429071-21429207,21429538-21429842,21430922-21431099,
21431192-21431305,21431373-21431504,21431610-21431843
Length = 1032
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 44 VRVNWSPVSGNTPPRVISDSYIVE--VRCIAAFH*NKEH 154
V+V WS +S + PR + D+Y++ + IA NKE+
Sbjct: 823 VKVTWSSLSKSLSPRGVVDTYVLNAYAKKIANDQNNKEN 861
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 44 VRVNWSPVSGNTPPRVISDSYIVE--VRCIAAFH*NKEH 154
V+V WS +S + PR + D+Y++ + IA NKE+
Sbjct: 576 VKVTWSSLSKSLSPRGVVDTYVLNAYAKKIANDQNNKEN 614
>02_04_0555 -
23840634-23841035,23841388-23841501,23841742-23841844,
23842415-23842467,23842544-23842644,23842702-23842879,
23842998-23843120,23843515-23843656,23843854-23843959,
23844236-23844305,23844430-23844588,23845229-23845329,
23845410-23845503
Length = 581
Score = 26.6 bits (56), Expect = 8.5
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 175 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTV-QGLSSEYDLKKIVRACK 351
I +LNTF PF D + S DV D VH ++ R + + QG E + A
Sbjct: 382 IVDLNTFFPFRDHM--SSQDVVD-FVHEKLNSRRQELCQSLINQGKKRECFTEDSQLATN 438
Query: 352 KEFACNGTVV 381
K A N T +
Sbjct: 439 KNIAPNTTTL 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,189,431
Number of Sequences: 37544
Number of extensions: 286215
Number of successful extensions: 961
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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