Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K06
         (280 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5GQY2 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_A1GA31 Cluster: Putative uncharacterized protein; n=3; ...    31   3.8  
UniRef50_A1G6U5 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  
UniRef50_Q10JI8 Cluster: Expressed protein; n=2; Oryza sativa (j...    30   8.7  

>UniRef50_Q5GQY2 Cluster: Putative uncharacterized protein; n=1;
          Cyanophage phage S-PM2|Rep: Putative uncharacterized
          protein - Cyanophage phage S-PM2
          Length = 67

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 8  GQSPFTQEECEEVNRLCRLATEE 76
          GQ+P TQEE +E  R+C ++ EE
Sbjct: 23 GQTPMTQEEIDEFRRVCEMSEEE 45


>UniRef50_A1GA31 Cluster: Putative uncharacterized protein; n=3;
          Salinispora|Rep: Putative uncharacterized protein -
          Salinispora arenicola CNS205
          Length = 711

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 1  ARGAKPLHPRRMRRSEPPVSPRDRRAD 81
          A GA+P HP   R ++P  +P  RRAD
Sbjct: 6  AGGAQPPHPEAARVTDPAATPTSRRAD 32


>UniRef50_A1G6U5 Cluster: Putative uncharacterized protein; n=1;
           Salinispora arenicola CNS205|Rep: Putative
           uncharacterized protein - Salinispora arenicola CNS205
          Length = 224

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 16  PLHPRRMRRSEPPVSPRDRRADGKLSPCCSAS 111
           P+  R  RR  P   P  R A  K+ PCCS S
Sbjct: 172 PVDERGGRRRRPSDGPISRSASPKVPPCCSPS 203


>UniRef50_Q10JI8 Cluster: Expressed protein; n=2; Oryza sativa
           (japonica cultivar-group)|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice)
          Length = 158

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 18/32 (56%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 16  PLHPRRMRRSEPPVSPRD--RRADGKLSPCCS 105
           P HPRR RRS    SPRD  RR  G L P  S
Sbjct: 69  PPHPRRRRRSGRRRSPRDGFRRRRGLLPPAWS 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,430,886
Number of Sequences: 1657284
Number of extensions: 2456015
Number of successful extensions: 7086
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7085
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)