Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K03
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   6.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.5  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   8.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.5  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 476 SVKASRACSRVCPFFEIPASNSPVP-AATISTA 381
           S++ASR   R CP  E+ +  +P P  A IS A
Sbjct: 15  SLEASRCVHRRCPKNEVYSCCAPCPQKACISEA 47


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 417 EFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGD 307
           E   T  DN +   S + + D+  DE +V    DD D
Sbjct: 754 ENEDTKADNMNNNHSDQLTGDNSADERAVPNDADDDD 790


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 280 WKFETGKYYVTIIDAPG 330
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 488 CLTPSVKASRACSRVCPFFEIPASNSPVP 402
           C    +K + AC R CP  ++P ++  VP
Sbjct: 265 CPEHLLKDNGACVRKCPKGKMPQNSECVP 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,624
Number of Sequences: 2352
Number of extensions: 11241
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)