Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K02
(427 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 109 2e-23
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 107 1e-22
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 102 4e-21
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 97 1e-19
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 83 2e-15
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 83 2e-15
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 82 5e-15
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 81 7e-15
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 81 9e-15
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 80 2e-14
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 80 2e-14
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 79 4e-14
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 78 7e-14
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 76 4e-13
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 75 5e-13
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 74 1e-12
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 64 9e-10
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 62 5e-09
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 62 6e-09
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 50 3e-05
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 49 4e-05
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 49 5e-05
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 48 6e-05
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 37 0.15
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 37 0.15
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.26
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.46
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.46
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 34 1.4
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 1.4
UniRef50_Q8IAJ9 Cluster: PF00_0002 protein; n=3; Plasmodium|Rep:... 33 1.9
UniRef50_Q0RUS4 Cluster: Possible transcriptional regulator, Whi... 33 3.3
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 3.3
UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza sa... 33 3.3
UniRef50_Q53L49 Cluster: Retrotransposon protein, putative, Ty3-... 33 3.3
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 3.3
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 3.3
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 3.3
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 3.3
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 4.3
UniRef50_Q4IUT5 Cluster: Regulatory protein, LacI:Periplasmic bi... 32 4.3
UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.3
UniRef50_Q4DZB2 Cluster: Putative uncharacterized protein; n=1; ... 32 4.3
UniRef50_A5E2N8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.3
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.3
UniRef50_Q9PEI1 Cluster: Putative zinc metalloprotease XF_1047; ... 32 4.3
UniRef50_UPI0001554912 Cluster: PREDICTED: similar to hCG38274; ... 32 5.7
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 32 5.7
UniRef50_Q10KH1 Cluster: Retrotransposon protein, putative, Ty3-... 32 5.7
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 5.7
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 32 5.7
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 5.7
UniRef50_A2QUC1 Cluster: Contig An09c0150, complete genome. prec... 32 5.7
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 5.7
UniRef50_A5FCI1 Cluster: Alpha-L-rhamnosidase precursor; n=3; Ba... 31 7.5
UniRef50_A3K7Z0 Cluster: Putative uncharacterized protein; n=3; ... 31 7.5
UniRef50_A1GCH8 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q8S656 Cluster: Putative Sorghum bicolor 22 kDa kafirin... 31 7.5
UniRef50_Q7XGB8 Cluster: Retrotransposon protein, putative, Ty3-... 31 7.5
UniRef50_Q2QSH3 Cluster: Retrotransposon protein, putative, Ty3-... 31 7.5
UniRef50_Q9UB28 Cluster: Myotactin form B; n=6; cellular organis... 31 7.5
UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY0132... 31 7.5
UniRef50_A0CEJ0 Cluster: Chromosome undetermined scaffold_171, w... 31 7.5
UniRef50_Q6BMB3 Cluster: 30S ribosomal protein S10, mitochondria... 31 7.5
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 7.5
UniRef50_Q72ZJ7 Cluster: Conserved domain protein; n=2; Bacillus... 31 9.9
UniRef50_Q53JF2 Cluster: Retrotransposon protein, putative, Ty3-... 31 9.9
UniRef50_A2YPD2 Cluster: Putative uncharacterized protein; n=2; ... 31 9.9
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 31 9.9
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 109 bits (262), Expect = 2e-23
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHNAVENQAFRK 243
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 4e-21
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +2
Query: 200 KIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 373
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 374 EERYKSGKNKWFFQKLRF 427
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 107 bits (256), Expect = 1e-22
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKT 60
Query: 205 KIHNAVENQAFRK 243
++H + + F K
Sbjct: 61 RLHKRSKIKPFIK 73
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 102 bits (244), Expect = 4e-21
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 205 KIHNAVENQAFRK 243
KI + + F K
Sbjct: 61 KIEKRNKLKPFLK 73
Score = 95.9 bits (228), Expect = 3e-19
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = +2
Query: 188 KGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNT 361
K K K R+K+KPF+K V+Y HL+PTRYSVD +F+K + + LK P+K++K
Sbjct: 55 KDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEV 114
Query: 362 RVRFEERYKSGKNKWFFQKLRF 427
+ +FEERYK+GKNKWFF KLRF
Sbjct: 115 KSKFEERYKTGKNKWFFTKLRF 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 97.5 bits (232), Expect = 1e-19
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 205 KIHNAVENQAFRK 243
K +AF K
Sbjct: 61 KFERRTRVKAFAK 73
Score = 65.7 bits (153), Expect = 4e-10
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +2
Query: 200 KIKFTMRSKIKPFVKGVNYNHLMPTRYSVD-FSFEK---FSAKDLKDPAKRKKLRFNTRV 367
K KF R+++K F K +NYNHLM TRYSV F +K F K+ + RK+ + +
Sbjct: 59 KKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQT 118
Query: 368 RFEERYKSGKNKWFFQKLRF 427
ER+ + KN+WFF KLRF
Sbjct: 119 VMRERFLAAKNRWFFTKLRF 138
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 83.4 bits (197), Expect = 2e-15
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 205 KIHNAVENQAFRK 243
K+ + + F K
Sbjct: 61 KVAKRTKIKPFIK 73
Score = 83.0 bits (196), Expect = 2e-15
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 379
K R+KIKPF+K VNYNHL+PTRY++D K S + + P++R++ + + FEE
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEE 120
Query: 380 RYKSGKNKWFFQKLRF 427
R+++GKN+WFF KLRF
Sbjct: 121 RHQAGKNQWFFSKLRF 136
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 83.0 bits (196), Expect = 2e-15
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +1
Query: 22 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 201
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 202 NKIHNAVENQAFRK 243
K+ + F K
Sbjct: 77 EKLKKKSTIKPFLK 90
Score = 43.2 bits (97), Expect = 0.002
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Frame = +2
Query: 188 KGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSV-DFSFEK-FSAKDLKDPAKRKK----- 346
K K K +S IKPF+K +N NH+MPTRY V DF + D+++ +K+
Sbjct: 72 KRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQALRAL 131
Query: 347 -LRFNTR-VRFE-ERYKSGKNKWFFQK-LRF 427
L FN + + + E+ K+ K+ F +K LRF
Sbjct: 132 HLAFNDKLINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 81.8 bits (193), Expect = 5e-15
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +1
Query: 19 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMG 198
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 199 KNKIHNAVENQAFRKRCKL 255
KI + F K L
Sbjct: 74 SKKIQKRTSVKPFIKYVNL 92
Score = 37.5 bits (83), Expect = 0.11
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVD 289
K R+ +KPF+K VN NH+MPTR ++
Sbjct: 76 KIQKRTSVKPFIKYVNLNHIMPTRGQIN 103
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 81.4 bits (192), Expect = 7e-15
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = +1
Query: 22 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 201
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 202 NKIHNAVENQAFRKRCKL 255
+I + F K+ L
Sbjct: 959 KQIRKRTTLKVFIKQLNL 976
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 18/88 (20%)
Frame = +2
Query: 218 RSKIKPFVKGVNYNHLMPTRYSVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRF 373
R+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR N R
Sbjct: 964 RTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKNLRKYL 1023
Query: 374 EERY----------KSGKNKWFFQKLRF 427
E+Y K ++++ F KLRF
Sbjct: 1024 AEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 81.0 bits (191), Expect = 9e-15
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 379
K RSK+KPFVK ++YNHLMPTRY+++ K + K+P++R+ + + FEE
Sbjct: 115 KIAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEE 174
Query: 380 RYKSGKNKWFFQKLRF 427
+Y SGKNKWFF LRF
Sbjct: 175 KYTSGKNKWFFTPLRF 190
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 52 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNAVEN 228
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI +
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 229 QAFRK 243
+ F K
Sbjct: 123 KPFVK 127
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 80.2 bits (189), Expect = 2e-14
Identities = 32/60 (53%), Positives = 47/60 (78%)
Frame = +1
Query: 31 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 210
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTI 61
Score = 71.3 bits (167), Expect = 8e-12
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +2
Query: 179 RFIKGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFN 358
+ ++G K RS++ F++ VN+ H +PTRY++D S E ++ D +K+ + +
Sbjct: 51 KVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQL 110
Query: 359 TRVRFEERYKSGKNKWFFQKLRF 427
R F+ RY +G N+WFFQ+LRF
Sbjct: 111 VRKLFQARYNAGSNRWFFQRLRF 133
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 79.8 bits (188), Expect = 2e-14
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Frame = +1
Query: 31 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKN 204
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 205 KIHNAVENQAFRK 243
I ++F K
Sbjct: 64 TILKRTAIRSFVK 76
Score = 62.9 bits (146), Expect = 3e-09
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Frame = +2
Query: 218 RSKIKPFVKGVNYNHLMPTRYSVDFSFEK-FSAK------DLKDPAKRKKLRFNTRVRFE 376
R+ I+ FVK VNYNH+MPTRY+ + E F+ + AKR R + FE
Sbjct: 68 RTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFE 127
Query: 377 ERYKSGKNKWFFQKLRF 427
++K+GK+KWFF KLRF
Sbjct: 128 AKHKAGKSKWFFSKLRF 144
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 79.0 bits (186), Expect = 4e-14
Identities = 37/98 (37%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 137 TDMLSSPASTDTRARFIKGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAK 316
T++L++ + A+ K ++ K RSK K F+K +NY+HLMPTRY++D +F+
Sbjct: 87 TEILTARSVAFENAQVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTS 146
Query: 317 DLKDPAKRK-KLRFNTRVRFEERYKSGKNKWFFQKLRF 427
D+ D A +K + + EER+K+GK++WFF +L F
Sbjct: 147 DVLDNATKKVAAQKEAKKLLEERFKTGKSRWFFTRLAF 184
Score = 74.9 bits (176), Expect = 6e-13
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +1
Query: 40 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNA 219
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRC 78
Query: 220 VENQAF 237
F
Sbjct: 79 ARTAPF 84
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 78.2 bits (184), Expect = 7e-14
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
Query: 205 KI 210
I
Sbjct: 61 TI 62
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +2
Query: 179 RFIKGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFN 358
+ ++G K RS++ F++ VN+ H +PTRY+VD S E ++ D +KR + +
Sbjct: 52 KVVRGMSKQTIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRL 111
Query: 359 TRVRFEERYKSGKNKWFFQKLRF 427
R F+ RY +G + WFFQ+LRF
Sbjct: 112 VRHVFQARYNAGSSMWFFQRLRF 134
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 75.8 bits (178), Expect = 4e-13
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = +2
Query: 218 RSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKS 391
RS+IKPF+K VNYNHLMPTRY+++ K S + K+ + R+ + + E+RY S
Sbjct: 115 RSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTS 174
Query: 392 GKNKWFFQKLRF 427
GKN+WFF LRF
Sbjct: 175 GKNRWFFTPLRF 186
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +1
Query: 31 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 210
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK +
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMV 112
Query: 211 HNAVENQAFRK 243
+ F K
Sbjct: 113 EKRSRIKPFIK 123
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 75.4 bits (177), Expect = 5e-13
Identities = 33/69 (47%), Positives = 50/69 (72%)
Frame = +1
Query: 37 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHN 216
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIK 156
Query: 217 AVENQAFRK 243
+ +AF K
Sbjct: 157 RSKVKAFVK 165
Score = 39.9 bits (89), Expect = 0.021
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 188 KGWEKIKFTMRSKIKPFVKGVNYNHLMPTRY 280
K K K RSK+K FVK +N NH++PTRY
Sbjct: 147 KKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 73.7 bits (173), Expect = 1e-12
Identities = 33/73 (45%), Positives = 51/73 (69%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 205 KIHNAVENQAFRK 243
KI ++ +AF K
Sbjct: 61 KIEKRLKLKAFVK 73
Score = 46.8 bits (106), Expect = 2e-04
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFE 376
K R K+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + + E
Sbjct: 61 KIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLE 120
Query: 377 ERYKSGKN 400
E + + +N
Sbjct: 121 ECFSNPEN 128
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 64.5 bits (150), Expect = 9e-10
Identities = 27/57 (47%), Positives = 41/57 (71%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRM 195
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKM 57
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +2
Query: 215 MRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV--RF 373
MR+ +K F K +N NH+MPT+Y+V + E+F+ K +K + K + + +F
Sbjct: 64 MRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAISSQF 121
Query: 374 EERYKSGKNKWFFQKLRF 427
E Y+ GK W F KLRF
Sbjct: 122 AEEYRKGKESWLFTKLRF 139
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 62.1 bits (144), Expect = 5e-09
Identities = 25/54 (46%), Positives = 41/54 (75%)
Frame = +1
Query: 34 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRM 195
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDM 56
Score = 50.0 bits (114), Expect = 2e-05
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Frame = +2
Query: 218 RSKIKPFVKGVNYNHLMPTRYSV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRFE 376
++++K FVK VN+NH+M TR++V DF F+K S + LKD +K L
Sbjct: 64 KTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVLR 122
Query: 377 ERYKSGKNKWFFQKLRF 427
++Y + K WFF+ L+F
Sbjct: 123 QKYLNNKMAWFFKPLQF 139
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 61.7 bits (143), Expect = 6e-09
Identities = 32/72 (44%), Positives = 41/72 (56%)
Frame = +2
Query: 212 TMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 391
T R + +P V G + H+ P S K K P KRK++RF TRV+ +E KS
Sbjct: 24 TQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQEGSKS 83
Query: 392 GKNKWFFQKLRF 427
G+NKWFFQK RF
Sbjct: 84 GRNKWFFQKGRF 95
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 49.6 bits (113), Expect = 3e-05
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 218 RSKIKPFVKGVNYNHLMPTRYSVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSG 394
R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R
Sbjct: 63 RGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEH 122
Query: 395 KNKWFFQKL 421
++ WFF KL
Sbjct: 123 RDTWFFTKL 131
Score = 45.2 bits (102), Expect = 6e-04
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1
Query: 34 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 213
I+KPG V +VL GR+AG+KA++V+ ++ +A VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPH---NERGSYAIVAGIAALPRRITNSMSDEEAV 61
Query: 214 NAVENQAFRKRCKLQSSNANPLFCRLQ 294
++F K C + ++ P CRL+
Sbjct: 62 CRGRVRSFVK-C-MNVNHLMPTSCRLE 86
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 82 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 201
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK 44
Score = 39.9 bits (89), Expect = 0.021
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEK 304
K + RSKIK FV NYNHL RYSVD +K
Sbjct: 45 KISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 48.8 bits (111), Expect = 5e-05
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGK 201
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEK---KIIILGIKKEMKKIKYNMSK 57
Query: 202 NKIHNAVENQAFRKRCKLQ 258
KI + + + F K ++
Sbjct: 58 RKIISNLRFKTFIKTINIK 76
Score = 37.1 bits (82), Expect = 0.15
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Frame = +2
Query: 200 KIKFTMRSKIKPFVKGVNYNHLMPTRYSVD-----------FSFEKFSAKDLKDPAKRKK 346
K K + K F+K +N H+ PTRY ++ + K K + ++ K
Sbjct: 57 KRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAK 116
Query: 347 LRF-NTRVRFEERYKSGKNKWFFQKLRF 427
+ + ++R GKN WFF+K++F
Sbjct: 117 VNLVSINNYLQDRLLRGKNLWFFKKMKF 144
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 48.4 bits (110), Expect = 6e-05
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 18/88 (20%)
Frame = +2
Query: 218 RSKIKPFVKGVNYNHLMPTRYSVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRF 373
R+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK LR N R
Sbjct: 175 RTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYL 234
Query: 374 EERY----------KSGKNKWFFQKLRF 427
E+Y K ++++ F KLRF
Sbjct: 235 AEKYRTLPAGSLADKKAQSRFLFSKLRF 262
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +1
Query: 100 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNAVENQAFRKRCKL 255
+K +E T D + + V GI RYPRKV KRMG+ +I + F K+ L
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNL 187
Score = 32.7 bits (71), Expect = 3.3
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +1
Query: 22 KMGKIMKPGKVVLVLSGRYAG 84
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 37.1 bits (82), Expect = 0.15
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 46 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNAVE 225
GK++ L+G+YAG+ +VK+Y + + K + H V + K + K+ I +
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTN--TKFTNKNSKSFISKMND 65
Query: 226 N-QAFRKRCKLQSSNAN 273
+ F+ + KL+ NAN
Sbjct: 66 QPKIFKYKIKLKILNAN 82
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 221 SKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGK 397
+K +K N HL+ TRY D ++D A+ KK+ N T+ + +K K
Sbjct: 57 AKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENK 116
Query: 398 NKWFFQKLRF 427
K+ F L F
Sbjct: 117 AKFLFSSLSF 126
Score = 33.5 bits (73), Expect = 1.9
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 43 PGKVVLVLSGRYAGRKAIVVKNYDE 117
P +V+V SG+ AG+KA+V+K DE
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE 29
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.3 bits (80), Expect = 0.26
Identities = 11/36 (30%), Positives = 28/36 (77%)
Frame = +1
Query: 13 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
+P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 35.5 bits (78), Expect = 0.46
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 13 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHK 189
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D R+V K
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGK 271
Query: 190 RMGK 201
G+
Sbjct: 272 FTGR 275
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.46
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 31 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 33.9 bits (74), Expect = 1.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
RT+ L RSFL LAG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 1.4
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 123
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q8IAJ9 Cluster: PF00_0002 protein; n=3; Plasmodium|Rep:
PF00_0002 protein - Plasmodium falciparum
Length = 873
Score = 33.5 bits (73), Expect = 1.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 115 EGTSDKPYGHAFVAGIDRYPRKV-HKRMGKNKIHNAVENQAFRKRCKLQSSN 267
+G +DK YG +VA I + P+ V HK K+K +VEN+ + K+ L +N
Sbjct: 775 KGYADKSYG-VYVAQIAQLPKSVIHKAFQKSKELESVENRHYFKKKLLTQTN 825
>UniRef50_Q0RUS4 Cluster: Possible transcriptional regulator, WhiB
family; n=2; Rhodococcus sp. RHA1|Rep: Possible
transcriptional regulator, WhiB family - Rhodococcus sp.
(strain RHA1)
Length = 106
Score = 32.7 bits (71), Expect = 3.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 205 YFFPSFYEPCAGICRCRRRKHVRMVCQMCPRRNSLRQWLYGLRTGR*G 62
+FFP EP R RR + + +C MCP + + R+ + L TG G
Sbjct: 41 FFFPRVGEPHGA--RVRRERAAKTICSMCPVQENCRE--HALATGEYG 84
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 3.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0018J12.12
protein - Oryza sativa subsp. japonica (Rice)
Length = 902
Score = 32.7 bits (71), Expect = 3.3
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFLRLAG +R F NFSK+
Sbjct: 562 KTVTQIRSFLRLAGYYRRFIENFSKI 587
>UniRef50_Q53L49 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 948
Score = 32.7 bits (71), Expect = 3.3
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
RT++ RSFL LAG +R F NFSK+
Sbjct: 691 RTVIQVRSFLGLAGYYRRFIENFSKI 716
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 3.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 3.3
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 3.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 3.3
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 117
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 32.3 bits (70), Expect = 4.3
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 104 RITTRAHLTNHTDMLSSPASTDTRARFIKGWEKIKFTMRSKIKPFV--KGVNYNHLMPTR 277
R+ +L + L SP D + IK K +F + F+ K + YN P
Sbjct: 837 RVQRCPNLCEDVEFLKSPPLLDELFKIIK--IKCQFYKNKEEPQFICNKILEYNEYSPHY 894
Query: 278 YSVDFSFEKFSAKDLKDPAKRKKL 349
Y+ +F +EK ++ KRK++
Sbjct: 895 YTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_Q4IUT5 Cluster: Regulatory protein, LacI:Periplasmic
binding protein/LacI transcriptional regulator; n=2;
Pseudomonadaceae|Rep: Regulatory protein,
LacI:Periplasmic binding protein/LacI transcriptional
regulator - Azotobacter vinelandii AvOP
Length = 379
Score = 32.3 bits (70), Expect = 4.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 249 TPFTKGLIFDRIVNFIFSHPFMNLARVSVD 160
TP T+ + D IV + SHP LAR +VD
Sbjct: 320 TPVTRAALNDGIVQVVLSHPLAELARSAVD 349
>UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 265
Score = 32.3 bits (70), Expect = 4.3
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 NHLMPTRYSVD-FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWF 409
N L P+ YSVD ++++S K L PA KLRF R YK G N F
Sbjct: 207 NDLRPSTYSVDNVEWQQYS-KTLLAPATANKLRFEVRT-----YKEGDNSGF 252
>UniRef50_Q4DZB2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 224
Score = 32.3 bits (70), Expect = 4.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 190 FYEPCAGICRCRRRKHVRMVCQMCPRRNSLRQWLYGLRTGR 68
FY CR RRRKH + Q P RNS+ + G G+
Sbjct: 91 FYWTSNAECRPRRRKHSHLAAQRGPHRNSMECYHGGSSRGK 131
>UniRef50_A5E2N8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 632
Score = 32.3 bits (70), Expect = 4.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 109 YDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNAVENQAFRKRCKLQ 258
YD T D Y F G+ Y K HK + N N++EN + LQ
Sbjct: 20 YDHDTFDAGYPVIFKKGVGLYDPKAHKPITTNLSSNSIENAVNQNASGLQ 69
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 4.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 290 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 391
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_Q9PEI1 Cluster: Putative zinc metalloprotease XF_1047;
n=13; Xanthomonadaceae|Rep: Putative zinc
metalloprotease XF_1047 - Xylella fastidiosa
Length = 444
Score = 32.3 bits (70), Expect = 4.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 154 RRKHVRMVCQMCPRRNSLRQWLYGLRTGR*GPAPLFQVS*SYPSWMDIPL 5
RR R+ ++ PR+++ WL G++T GP P F Y +PL
Sbjct: 276 RRGEERLALELSPRKSAQGVWLLGVKTNP-GPVPAFDSQQRYGVLAAVPL 324
>UniRef50_UPI0001554912 Cluster: PREDICTED: similar to hCG38274; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
hCG38274 - Ornithorhynchus anatinus
Length = 2066
Score = 31.9 bits (69), Expect = 5.7
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 77 TQAVKPLS*RITTRAHLTNHTDMLSSPASTDTRARFIK----GWEKIKFTMRSKIKPFVK 244
TQ VKPL+ +T+ + N T S ++ +++ G E +K+ + S P+VK
Sbjct: 1728 TQMVKPLTKPPSTKVEIKNRTITFPETVSGESSESYLELENHGNEDVKWHLSSFAPPYVK 1787
Query: 245 GVN 253
GV+
Sbjct: 1788 GVD 1790
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 31.9 bits (69), Expect = 5.7
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 161 MPATKACPYGLSDVPSS*FFTTMALRPAYRPLRTSTTFPGFIILPILDG 15
+P+T A PY S + + YR +R S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_Q10KH1 Cluster: Retrotransposon protein, putative, Ty3-gypsy
subclass; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy subclass - Oryza sativa subsp. japonica (Rice)
Length = 1357
Score = 31.9 bits (69), Expect = 5.7
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -2
Query: 417 FWKNHLFFPLLYLSSKRTLVLKRSFLRLAGSFRSFALNFSKL 292
FW + + F L +T+ RSFL LAG +R F NFSK+
Sbjct: 894 FWLSEVKF--LGHKQPKTVTQVRSFLGLAGYYRRFIENFSKI 933
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 5.7
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 10 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 105
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 31.9 bits (69), Expect = 5.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 269 PTRYSVDFSFEKFSAKDLKDPAKRKKLRF 355
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 5.7
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +1
Query: 43 PGKVVLVLSGRYAGRKAIVVKNYDEG 120
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_A2QUC1 Cluster: Contig An09c0150, complete genome.
precursor; n=3; Pezizomycotina|Rep: Contig An09c0150,
complete genome. precursor - Aspergillus niger
Length = 505
Score = 31.9 bits (69), Expect = 5.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 7 GEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGH 144
G +P G ++ +V + +G++A ++ N+DEGT P+G+
Sbjct: 310 GYHPVIDGDFLRASGIVNLQTGQFAKTPLLIGTNFDEGTKYAPHGY 355
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 31.9 bits (69), Expect = 5.7
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 260 HLMPTRYSVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 406
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_A5FCI1 Cluster: Alpha-L-rhamnosidase precursor; n=3;
Bacteroidetes|Rep: Alpha-L-rhamnosidase precursor -
Flavobacterium johnsoniae UW101
Length = 916
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 121 CPRRNSLRQWLYGLRTGR*GPAPLFQVS*SYPSWMD 14
CP+RN + WL TG G + LF Y W+D
Sbjct: 495 CPQRNERQPWLGDRTTGAYGESFLFDNQTLYAKWLD 530
>UniRef50_A3K7Z0 Cluster: Putative uncharacterized protein; n=3;
Rhodobacterales|Rep: Putative uncharacterized protein -
Sagittula stellata E-37
Length = 379
Score = 31.5 bits (68), Expect = 7.5
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3
Query: 104 FTTMALRPAYRPLRTSTTFPGFIIL 30
F T A+RP YRPLRTS GF+IL
Sbjct: 226 FPTGAMRPIYRPLRTS---DGFVIL 247
>UniRef50_A1GCH8 Cluster: Putative uncharacterized protein; n=1;
Salinispora arenicola CNS205|Rep: Putative
uncharacterized protein - Salinispora arenicola CNS205
Length = 494
Score = 31.5 bits (68), Expect = 7.5
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 33 DYETWKSGAGPQRPVRRP*SHCRKELRRGHI*QTIRTCFRRRHRQI 170
D+ W SG G +RP RR R ++ RGH ++ RR HR +
Sbjct: 354 DHGGW-SGRGDRRPSRRVPGQVRHQVHRGHR-PRLQPAHRRHHRHL 397
>UniRef50_Q8S656 Cluster: Putative Sorghum bicolor 22 kDa kafirin
cluster; n=2; Oryza sativa|Rep: Putative Sorghum bicolor
22 kDa kafirin cluster - Oryza sativa (Rice)
Length = 1143
Score = 31.5 bits (68), Expect = 7.5
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
RT+ RSFL LAG +R F NFSK+
Sbjct: 470 RTVTQVRSFLGLAGYYRRFIENFSKI 495
>UniRef50_Q7XGB8 Cluster: Retrotransposon protein, putative,
Ty3-gypsy subclass; n=2; Oryza sativa|Rep:
Retrotransposon protein, putative, Ty3-gypsy subclass -
Oryza sativa subsp. japonica (Rice)
Length = 1264
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 351 RSFLRLAGSFRSFALNFSKL 292
RSFLRLAG +R F NFSK+
Sbjct: 373 RSFLRLAGYYRRFIENFSKI 392
>UniRef50_Q2QSH3 Cluster: Retrotransposon protein, putative, Ty3-gypsy
subclass, expressed; n=12; Magnoliophyta|Rep:
Retrotransposon protein, putative, Ty3-gypsy subclass,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1656
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG++R F NFSK+
Sbjct: 976 KTVTQVRSFLGLAGNYRRFIENFSKI 1001
>UniRef50_Q9UB28 Cluster: Myotactin form B; n=6; cellular
organisms|Rep: Myotactin form B - Caenorhabditis elegans
Length = 4450
Score = 31.5 bits (68), Expect = 7.5
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = -2
Query: 171 VSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFHNLTHLGWIFP 7
V+V E +WF+ + G +PA D H + + H+ W+ P
Sbjct: 3428 VTVQGTSEGNKLWFISSVFSTTDFAEGLLNWLPAPTDLHLIEKSDTMLHVDWVPP 3482
>UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY01329;
n=18; Plasmodium (Vinckeia)|Rep: Putative
uncharacterized protein PY01329 - Plasmodium yoelii
yoelii
Length = 5432
Score = 31.5 bits (68), Expect = 7.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 251 NYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRV 367
NY+ ++PT+Y F FS ++ D +K++K N R+
Sbjct: 551 NYDVVIPTKYDFQFKLSNFSI-NIYDDSKKRKYIINNRI 588
>UniRef50_A0CEJ0 Cluster: Chromosome undetermined scaffold_171,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 382
Score = 31.5 bits (68), Expect = 7.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 161 STDTRARFIKGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYS 283
STDT WE +K+T + G+ NHL RYS
Sbjct: 37 STDTEPHL--AWETVKYTFEIIKTDLIHGIEENHLFTRRYS 75
>UniRef50_Q6BMB3 Cluster: 30S ribosomal protein S10, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 30S ribosomal
protein S10, mitochondrial precursor - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 267
Score = 31.5 bits (68), Expect = 7.5
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 230 KPFVKGVNYNHLMPTRYSVDF--SFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 403
K ++GV YN L+ TR S+DF + SA D+ P K + EE KS K
Sbjct: 192 KHAIEGVKYNALIHTRESLDFCEKLDALSADDMHMPDAYKGSDDPIANKVEELLKSDTFK 251
Query: 404 WFFQK 418
+F +
Sbjct: 252 KYFDE 256
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 22 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 135
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
>UniRef50_Q72ZJ7 Cluster: Conserved domain protein; n=2; Bacillus
cereus|Rep: Conserved domain protein - Bacillus cereus
(strain ATCC 10987)
Length = 923
Score = 31.1 bits (67), Expect = 9.9
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 143 MLSSPASTDTRARFIKGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDL 322
+LS DTR +K + + + +K+K + +NY+H Y + F+F+K S K L
Sbjct: 402 VLSEDKKADTRVVEVKV-DDLSKKLNAKVKVDIDSMNYHHF----YDIQFAFDKDSIKPL 456
>UniRef50_Q53JF2 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 689
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
RT+ RSFL LAG +R F NFSK+
Sbjct: 636 RTVTQIRSFLGLAGYYRRFIENFSKI 661
>UniRef50_A2YPD2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 442
Score = 31.1 bits (67), Expect = 9.9
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = -2
Query: 165 VDAGDESMSVW--FVRCALVVILYDN----GFTACVPAAEDQHHFSRFHNLTHLGWIFPS 4
VD +S S+W FV C+ +I N AC+PA + +RFH+ +G + PS
Sbjct: 147 VDLDTDSGSIWACFVNCSKPIIADANMPRYRPLACLPANNSFFYLNRFHSCA-VGELQPS 205
Query: 3 C 1
C
Sbjct: 206 C 206
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 31.1 bits (67), Expect = 9.9
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 22 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
K+ + +KPG V+++L+G Y G++ +++K G
Sbjct: 39 KVRESLKPGAVLILLTGSYKGKRVVLLKVLKSG 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,419,767
Number of Sequences: 1657284
Number of extensions: 9398686
Number of successful extensions: 25635
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 25048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25615
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -