Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K02
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    62   3e-12
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.7  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 61.7 bits (143), Expect = 3e-12
 Identities = 32/72 (44%), Positives = 41/72 (56%)
 Frame = +2

Query: 212 TMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 391
           T R + +P V G +  H+ P       S      K  K P KRK++RF TRV+ +E  KS
Sbjct: 24  TQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQEGSKS 83

Query: 392 GKNKWFFQKLRF 427
           G+NKWFFQK RF
Sbjct: 84  GRNKWFFQKGRF 95


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 79  AGRKAIVVKNYDEGTSDKP 135
           AG+K   VK  DE   +KP
Sbjct: 73  AGKKPENVKKEDESDEEKP 91


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 230 KPFVKGVNYNHLMPTRYS 283
           K F   VN  HL+ T+Y+
Sbjct: 83  KNFTNIVNLTHLLETQYA 100


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 281 SVDFSFEKFSA 313
           SVDF F+ FSA
Sbjct: 81  SVDFLFDNFSA 91


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 281 SVDFSFEKFSA 313
           SVDF F+ FSA
Sbjct: 314 SVDFLFDNFSA 324


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 281 SVDFSFEKFSA 313
           SVDF F+ FSA
Sbjct: 314 SVDFLFDNFSA 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,983
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)