Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K02
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0470 - 10700092-10700505 82 2e-16
10_08_0951 - 21769342-21769752 81 5e-16
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.032
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 30 0.68
10_02_0059 + 4785858-4786988 30 0.90
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 30 0.90
09_02_0555 - 10588685-10592038 30 0.90
03_02_1029 - 13488535-13493037 30 0.90
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 2.1
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 29 2.1
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 2.1
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 2.1
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 2.1
08_01_0775 - 7531397-7531564,7531590-7532771 28 2.7
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 28 3.6
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 28 3.6
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 28 3.6
04_04_0489 + 25600543-25601368,25601441-25602282 27 4.8
04_04_0422 + 25098612-25099025,25099500-25099633,25099817-251000... 27 4.8
09_06_0145 + 21162308-21163666 27 6.3
05_01_0055 - 390371-390457,390637-390715,390804-390856,390951-39... 27 6.3
10_04_0010 - 7487455-7489490,7489569-7489980 27 8.3
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503... 27 8.3
>02_02_0470 - 10700092-10700505
Length = 137
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 205 KIHNAVENQAFRK 243
K + F K
Sbjct: 61 KTAKKSRVKCFLK 73
Score = 68.1 bits (159), Expect = 3e-12
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKR-KKLRF--NTRVRFE 376
K +S++K F+K VN+ H+MPTRY++D F+ ++ A R KK+ + R E
Sbjct: 61 KTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLE 120
Query: 377 ERYKSGKNKWFFQKLRF 427
ER+K+GKN+WFF KLRF
Sbjct: 121 ERFKTGKNRWFFTKLRF 137
>10_08_0951 - 21769342-21769752
Length = 136
Score = 80.6 bits (190), Expect = 5e-16
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 205 KIHNAVENQAFRK 243
K + F K
Sbjct: 61 KTAKKSRVKCFLK 73
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +2
Query: 206 KFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRF--NTRVRFEE 379
K +S++K F+K VN+ HLMPTRY++D ++ +A + KK+ + + R E+
Sbjct: 61 KTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLED 120
Query: 380 RYKSGKNKWFFQKLRF 427
R+K+GKN+WFF KLRF
Sbjct: 121 RFKTGKNRWFFTKLRF 136
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 34.7 bits (76), Expect = 0.032
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 68 PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 30.3 bits (65), Expect = 0.68
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 381 LSSKRTLVLKRSFLRLAGSFRSFALNFSKL 292
L +++ RSFL LAG +R F NFSK+
Sbjct: 495 LKQPKSVTQVRSFLGLAGYYRRFIKNFSKI 524
>10_02_0059 + 4785858-4786988
Length = 376
Score = 29.9 bits (64), Expect = 0.90
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG +R F NFSK+
Sbjct: 218 KTVTQIRSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 29.9 bits (64), Expect = 0.90
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG +R F NFSK+
Sbjct: 275 KTVTQIRSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 29.9 bits (64), Expect = 0.90
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG +R F NFSK+
Sbjct: 405 KTVTQIRSFLGLAGYYRRFIENFSKI 430
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.9 bits (64), Expect = 0.90
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG +R F NFSK+
Sbjct: 788 KTVTQIRSFLGLAGYYRRFIENFSKI 813
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 351 RSFLRLAGSFRSFALNFSKL 292
RSFL LAG +R F NFSK+
Sbjct: 954 RSFLGLAGYYRRFIENFSKI 973
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 351 RSFLRLAGSFRSFALNFSKL 292
RSFL LAG +R F NFSK+
Sbjct: 453 RSFLGLAGYYRRFIENFSKI 472
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 351 RSFLRLAGSFRSFALNFSKL 292
RSFL LAG +R F NFSK+
Sbjct: 985 RSFLGLAGYYRRFIENFSKI 1004
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 351 RSFLRLAGSFRSFALNFSKL 292
RSFL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 120
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>08_01_0775 - 7531397-7531564,7531590-7532771
Length = 449
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ R FL LAG +R F NFSK+
Sbjct: 84 KTVTQVRRFLGLAGYYRRFIENFSKI 109
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 64 LSGRYAGRKAIVVKNYDEGTSD-KPYGHAFVAGIDRYPRKVHKRMGKNKI 210
L R AG + ++ + GT D G V G+D R+VH G +
Sbjct: 599 LEHRMAGVYTVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQGMGAV 648
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 167 DTRARFIKGWEKIKFTMRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKK 346
D R F+KG+ I++ + + +K ++ L+ SVD++F P KR+
Sbjct: 135 DRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFS-------NGPVKRRN 187
Query: 347 LR 352
+R
Sbjct: 188 IR 189
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG +R F NFS++
Sbjct: 635 KTVSQIRSFLGLAGYYRRFIENFSRI 660
>04_04_0489 + 25600543-25601368,25601441-25602282
Length = 555
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 106 NYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNAVENQA 234
NY+EGT YGH + I+ P K + + G K ++ ++ +
Sbjct: 110 NYEEGTGLGKYGHGIIDPIN--PTKKYGKGGVGKFESSYDSDS 150
>04_04_0422 +
25098612-25099025,25099500-25099633,25099817-25100067,
25100130-25100494
Length = 387
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 106 NYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHNAVENQA 234
NY+EGT YGH + I+ P K + + G K ++ ++ +
Sbjct: 43 NYEEGTGLGKYGHGIIDPIN--PTKKYGKGGVGKFESSYDSDS 83
>09_06_0145 + 21162308-21163666
Length = 452
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 256 VVYTFYERLDFRPHCEFYFFPSFYEPCAGI 167
+ + FYE LDF C YF PS++ P G+
Sbjct: 390 LTFPFYE-LDFGGGCPTYFMPSYF-PTEGM 417
>05_01_0055 -
390371-390457,390637-390715,390804-390856,390951-391105,
391216-391422,391518-391658,392044-392202,392296-392476,
393153-393252,393321-393470,393581-393705,394006-394096,
394364-394472,394558-394657,395143-395307,395401-395506,
395590-395894,396003-396241,397036-397114,397189-397327,
398004-398054,398316-398770,398961-399158,399199-399261,
400212-400436,400706-400988,401109-401170
Length = 1368
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 384 YLSSKRTLVLKRSFLRLAGSFRSFALNFSKLKSTE 280
Y S K L + L G+ R+F+ F KLKSTE
Sbjct: 267 YASPKYMLWIVGYILVAGGAIRNFSPAFGKLKSTE 301
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 369 RTLVLKRSFLRLAGSFRSFALNFSKL 292
+T+ RSFL LAG + F NFSK+
Sbjct: 148 KTVTQIRSFLGLAGYYWRFIENFSKI 173
>03_06_0285 +
32848085-32848988,32849057-32849245,32850136-32850311,
32850569-32851141
Length = 613
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 125 LTNHTDMLSSPASTDTRARFIK 190
LT++T SSPA+T T A FI+
Sbjct: 505 LTDYTGTPSSPATTTTNATFIR 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,568,471
Number of Sequences: 37544
Number of extensions: 262049
Number of successful extensions: 778
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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