Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K01
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 292 8e-79
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 292 8e-79
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 292 8e-79
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 291 2e-78
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 289 7e-78
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 289 7e-78
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 264 1e-70
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 256 5e-68
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 55 2e-07
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 55 2e-07
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 55 2e-07
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 55 2e-07
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 55 2e-07
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 54 4e-07
U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein. 30 6.0
U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein. 30 6.0
U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3 pro... 30 6.0
U59289-1|AAB18912.1| 713|Homo sapiens H-cadherin protein. 30 6.0
U59288-1|AAB18911.1| 713|Homo sapiens H-cadherin protein. 30 6.0
L34058-1|AAA35624.1| 713|Homo sapiens cadherin-13 protein. 30 6.0
BC030653-1|AAH30653.1| 713|Homo sapiens cadherin 13, H-cadherin... 30 6.0
BC028624-1|AAH28624.1| 713|Homo sapiens cadherin 13, H-cadherin... 30 6.0
BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3 p... 30 6.0
AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3 p... 30 6.0
AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3 p... 30 6.0
AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3 p... 30 6.0
AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C ... 30 6.0
AB001103-1|BAA32411.1| 713|Homo sapiens H-cadherin protein. 30 6.0
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 292 bits (716), Expect = 8e-79
Identities = 137/173 (79%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 291 bits (713), Expect = 2e-78
Identities = 136/173 (78%), Positives = 154/173 (89%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 289 bits (708), Expect = 7e-78
Identities = 137/173 (79%), Positives = 152/173 (87%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 289 bits (708), Expect = 7e-78
Identities = 136/173 (78%), Positives = 153/173 (88%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEAT 593
V +PA NTGLGPEKTSF QAL I TKIS+GTIEI+SDV ++K GDKVGASEAT
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 264 bits (648), Expect = 1e-70
Identities = 126/177 (71%), Positives = 145/177 (81%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEATSSQH 605
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+ ++ ++G S H
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILGVRNVASVCLQIGYPTVASVPH 177
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 256 bits (627), Expect = 5e-68
Identities = 124/177 (70%), Positives = 144/177 (81%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 434
MRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 435 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIISDVHILKPGDKVGASEATSSQH 605
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+ ++ ++G S H
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILGVRNVASVCLQIGYPTVASVPH 176
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 54.8 bits (126), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 102 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 269
K N ++ + +D Y FI N+ + +++ IR + + HS + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSP 81
Query: 270 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 449
D + N L ++ ++G VG +FT +V + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 450 HNTGLGPEKTS-FFQALSIPTKISKGTIEIISDVHILKPGDKVGASEA 590
P + L +PT + +G + ++SD + K GD + +A
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQA 187
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 54.8 bits (126), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 102 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 269
K N ++ + +D Y FI N+ + +++ IR + + HS + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSP 81
Query: 270 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 449
D + N L ++ ++G VG +FT +V + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 450 HNTGLGPEKTS-FFQALSIPTKISKGTIEIISDVHILKPGDKVGASEA 590
P + L +PT + +G + ++SD + K GD + +A
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQA 187
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 54.8 bits (126), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 102 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 269
K N ++ + +D Y FI N+ + +++ IR + + HS + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSP 81
Query: 270 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 449
D + N L ++ ++G VG +FT +V + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 450 HNTGLGPEKTS-FFQALSIPTKISKGTIEIISDVHILKPGDKVGASEA 590
P + L +PT + +G + ++SD + K GD + +A
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQA 187
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 54.8 bits (126), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 102 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 269
K N ++ + +D Y FI N+ + +++ IR + + HS + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSP 81
Query: 270 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 449
D + N L ++ ++G VG +FT +V + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 450 HNTGLGPEKTS-FFQALSIPTKISKGTIEIISDVHILKPGDKVGASEA 590
P + L +PT + +G + ++SD + K GD + +A
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQA 187
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 54.8 bits (126), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 102 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 269
K N ++ + +D Y FI N+ + +++ IR + + HS + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSP 81
Query: 270 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 449
D + N L ++ ++G VG +FT +V + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 450 HNTGLGPEKTS-FFQALSIPTKISKGTIEIISDVHILKPGDKVGASEA 590
P + L +PT + +G + ++SD + K GD + +A
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQA 187
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 54.0 bits (124), Expect = 4e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 102 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 269
K N ++ + +D Y FI N+ + +++ IR + + HS + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSP 81
Query: 270 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 449
D + N L ++ ++G VG +FT +V + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 450 HNTGLGPEKTS-FFQALSIPTKISKGTIEIISDVHILKPGDKVGASEA 590
P + L +PT + +G + ++SD + K GD + +A
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQA 187
>U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein.
Length = 429
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 229 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 277
>U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>U59289-1|AAB18912.1| 713|Homo sapiens H-cadherin protein.
Length = 713
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 572 LITRLQDMDITDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 414
L+T +D+D T F + +++ + +E++S+L S GND ++ S
Sbjct: 18 LLTSAEDLDCTPGFQQKVFHINQPAEFIEDQSILNLTFSDCKGNDKLRYEVSS 70
>U59288-1|AAB18911.1| 713|Homo sapiens H-cadherin protein.
Length = 713
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 572 LITRLQDMDITDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 414
L+T +D+D T F + +++ + +E++S+L S GND ++ S
Sbjct: 18 LLTSAEDLDCTPGFQQKVFHINQPAEFIEDQSILNLTFSDCKGNDKLRYEVSS 70
>L34058-1|AAA35624.1| 713|Homo sapiens cadherin-13 protein.
Length = 713
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 572 LITRLQDMDITDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 414
L+T +D+D T F + +++ + +E++S+L S GND ++ S
Sbjct: 18 LLTSAEDLDCTPGFQQKVFHINQPAEFIEDQSILNLTFSDCKGNDKLRYEVSS 70
>BC030653-1|AAH30653.1| 713|Homo sapiens cadherin 13, H-cadherin
(heart) protein.
Length = 713
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 572 LITRLQDMDITDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 414
L+T +D+D T F + +++ + +E++S+L S GND ++ S
Sbjct: 18 LLTSAEDLDCTPGFQQKVFHINQPAEFIEDQSILNLTFSDCKGNDKLRYEVSS 70
>BC028624-1|AAH28624.1| 713|Homo sapiens cadherin 13, H-cadherin
(heart) protein.
Length = 713
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 572 LITRLQDMDITDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 414
L+T +D+D T F + +++ + +E++S+L S GND ++ S
Sbjct: 18 LLTSAEDLDCTPGFQQKVFHINQPAEFIEDQSILNLTFSDCKGNDKLRYEVSS 70
>BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3
protein.
Length = 259
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 134 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 182
>AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C
protein.
Length = 371
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 87 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 224
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 171 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 219
>AB001103-1|BAA32411.1| 713|Homo sapiens H-cadherin protein.
Length = 713
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 572 LITRLQDMDITDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 414
L+T +D+D T F + +++ + +E++S+L S GND ++ S
Sbjct: 18 LLTSAEDLDCTPGFQQKVFHINQPAEFIEDQSILNLTFSDCKGNDKLRYEVSS 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,322,575
Number of Sequences: 237096
Number of extensions: 2464319
Number of successful extensions: 5275
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5274
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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