Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J24
(293 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 157 1e-39
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 157 2e-39
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 3e-39
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 156 3e-39
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 155 6e-39
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 6e-39
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 154 1e-38
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-38
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-38
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-27
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 3e-15
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 62 6e-11
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 60 4e-10
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 58 1e-09
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-09
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.040
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.37
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.65
SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14) 29 0.86
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.86
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 28 1.1
SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32) 27 2.0
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 27 2.6
SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1) 27 2.6
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 2.6
SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3) 27 3.5
SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94) 26 4.6
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.0
SB_38159| Best HMM Match : Peptidase_M28 (HMM E-Value=4.7e-09) 26 6.0
SB_7097| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.0
SB_53274| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_31229| Best HMM Match : TP2 (HMM E-Value=1.7) 25 8.0
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 25 8.0
SB_3658| Best HMM Match : Keratin_B2 (HMM E-Value=3) 25 8.0
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019) 25 8.0
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 157 bits (382), Expect = 1e-39
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +2
Query: 77 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 256
Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 257 GKHVPRAVFVDL 292
GKHVPRAVFVDL
Sbjct: 492 GKHVPRAVFVDL 503
Score = 157 bits (381), Expect = 1e-39
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 HVPRAVFVDL 292
HVPRAVFVDL
Sbjct: 61 HVPRAVFVDL 70
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 157 bits (380), Expect = 2e-39
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +2
Query: 62 VQKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 241
V + +Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFF
Sbjct: 507 VPRVEYQ-RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFF 565
Query: 242 SETGAGKHVPRAVFVDL 292
SETGAGKHVPRAVFVDL
Sbjct: 566 SETGAGKHVPRAVFVDL 582
Score = 155 bits (377), Expect = 4e-39
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 265
RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 266 VPRAVFVDL 292
VPRAVFVDL
Sbjct: 126 VPRAVFVDL 134
Score = 155 bits (377), Expect = 4e-39
Identities = 67/70 (95%), Positives = 70/70 (100%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 263 HVPRAVFVDL 292
HVPRAVFVDL
Sbjct: 646 HVPRAVFVDL 655
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 156 bits (378), Expect = 3e-39
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = +2
Query: 77 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 256
Y+ REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 257 GKHVPRAVFVDL 292
GKHVPRAVFVDL
Sbjct: 477 GKHVPRAVFVDL 488
Score = 123 bits (296), Expect = 3e-29
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +2
Query: 128 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 292
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DL
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDL 55
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 156 bits (378), Expect = 3e-39
Identities = 67/70 (95%), Positives = 70/70 (100%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 HVPRAVFVDL 292
HVPRAVFVDL
Sbjct: 61 HVPRAVFVDL 70
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 155 bits (376), Expect = 6e-39
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 266 VPRAVFVDL 292
VPRAVFVDL
Sbjct: 61 VPRAVFVDL 69
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 155 bits (376), Expect = 6e-39
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +2
Query: 77 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 256
Y+ RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 257 GKHVPRAVFVDL 292
GKHVPRAVF DL
Sbjct: 863 GKHVPRAVFADL 874
Score = 153 bits (370), Expect = 3e-38
Identities = 65/69 (94%), Positives = 69/69 (100%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 266 VPRAVFVDL 292
VPRAVFVDL
Sbjct: 433 VPRAVFVDL 441
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 154 bits (374), Expect = 1e-38
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 263 HVPRAVFVDL 292
HVPRAVFVDL
Sbjct: 61 HVPRAVFVDL 70
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 153 bits (371), Expect = 2e-38
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 263 HVPRAVFVDL 292
HVPRAVF DL
Sbjct: 61 HVPRAVFCDL 70
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 153 bits (371), Expect = 2e-38
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 263 HVPRAVFVDL 292
HVPRAVFVDL
Sbjct: 61 HVPRAVFVDL 70
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 3e-27
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 263 H 265
H
Sbjct: 256 H 256
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 76.6 bits (180), Expect = 3e-15
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +2
Query: 188 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 292
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDL
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDL 35
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 62.5 bits (145), Expect = 6e-11
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = +2
Query: 68 KTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
K +KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 248 TGAGKHVPRAVFVDL 292
GK+VPRAV VDL
Sbjct: 267 ATGGKYVPRAVLVDL 281
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 59.7 bits (138), Expect = 4e-10
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 263 HVPRAVFVDL 292
+VPR+V +DL
Sbjct: 59 YVPRSVLIDL 68
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 263 HVPRAVFVDL 292
+VPRA+ VDL
Sbjct: 59 YVPRAILVDL 68
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 263 HVPRAVFVDL 292
+VPRA+ VDL
Sbjct: 59 YVPRAILVDL 68
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 33.1 bits (72), Expect = 0.040
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 269
SAS A + + + + S + ++ A + QL + ETTP+T +SA A+T
Sbjct: 196 SASSVIQASSSTSAVVASSSAVIMTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTT 255
Query: 270 PVPSSSI 290
++S+
Sbjct: 256 KATTTSV 262
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 242 SETGAGKHVPRAVFVDL 292
SE AGK+VPRAV VDL
Sbjct: 965 SEAAAGKYVPRAVLVDL 981
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 0.65
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 143 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14)
Length = 904
Score = 28.7 bits (61), Expect = 0.86
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 120 ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 290
E S+ +C S A+N + L+ P+ + T+ +RSS+ + P+P+SSI
Sbjct: 605 EGGSQQWPHTCTPTSDATNGLP-ASLSLPTVIHTSARSRSSSSSSASLLTPIPTSSI 660
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 0.86
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 164 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 280
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 259
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 260 KHVPRAVF 283
KH P F
Sbjct: 296 KHAPVRTF 303
>SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32)
Length = 355
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 93 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARP 251
A+LYT+ RS + I S+ + +V + RPS ++T T + RP
Sbjct: 245 ATLYTIRPSSHRSTLVTSCTIRPSSHRSTLVTSCIIRPSSHKSTLVTLCTIRP 297
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 291 RSTKTARGTCLPAPVSLKNV-LKESSPPPMVLSVGI 187
R+ RGTCLP+ L+ V LK+ + LSVG+
Sbjct: 753 RAMVICRGTCLPSRDMLRRVLLKKGAREQGTLSVGV 788
>SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.1 bits (57), Expect = 2.6
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -2
Query: 280 DGTGNVLASSGLAEERVEGVV--STPDGLVSWHLTIRLDAVLKAIQLPAGISDLD--SGL 113
DG G + + GLAEE+ +G+ + DG+ + D + K + GI+DL G+
Sbjct: 278 DGDGVTVQADGLAEEKADGIADGTKADGMAD---ETKADGMAKETKAD-GIADLTKADGI 333
Query: 112 ANV 104
A+V
Sbjct: 334 ADV 336
>SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1)
Length = 1141
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 144 GSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 254
GS +AL+ ++ RCQ P G + +SA P+
Sbjct: 956 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPD 992
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 144 GSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 254
GS +AL+ ++ RCQ P G + +SA P+
Sbjct: 1142 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPD 1178
>SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)
Length = 452
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 93 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTR 236
+S Y ES+ E S + TA + RC+L R +G+E P +
Sbjct: 41 SSHYRTLPSESQRERALDSSESALTAGSEDSRCRLDRLTGMEVNPEVK 88
>SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94)
Length = 969
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 164 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 268
HG+ P +M T+ GGD N S G+ K++
Sbjct: 716 HGLTPTSEMETETEGEGGDADNNEETSLDGSSKNI 750
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 25.8 bits (54), Expect = 6.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 123 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSS 287
S S A S T S + +R T S + TTPST S +R +T PS+S
Sbjct: 120 SNSTTRAPSTSTPRTGSTITLRTSTT--SVMTTTPSTTSISRAGSTTTTSDPSTS 172
>SB_38159| Best HMM Match : Peptidase_M28 (HMM E-Value=4.7e-09)
Length = 1049
Score = 25.8 bits (54), Expect = 6.0
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -1
Query: 293 QDRRRRHGERACQLXXXXXXXXXXRLHPRWSCQLASDHQVGCRAQGNTAPSRHFRSGL-- 120
QDR+RRH ER Q+ PR +C ++ + G + + +P R SG+
Sbjct: 395 QDRKRRHKERRTQMNERLCCESTPL--PRCTC-AQTELESGSNSLSDGSPQRR-NSGVYR 450
Query: 119 RLGQRVQRCTHAFCI 75
L + V+ C C+
Sbjct: 451 TLERTVEECECPQCV 465
>SB_7097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 197 DKTIGGGDDSFNTFFSETGAGKHVPR 274
DKT+ GD + NT + +H+P+
Sbjct: 129 DKTVMDGDGNLNTLVDDYEVMRHIPK 154
>SB_53274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 289 IDEDGTGNVLASSGLAEERVEG 224
ID DGTGN S G + + V G
Sbjct: 449 IDSDGTGNTQGSHGESNKTVHG 470
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 189 CQLTRPSGVETTPSTRSS-ARPELASTFPVPSS 284
C L+ PS +TPSTRS+ + P ST PS+
Sbjct: 635 CTLSTPS-TPSTPSTRSTPSTPSTPSTPSTPST 666
>SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 203 SCQLASDHQVGCRAQGNTAPSRHFR 129
+C + Q C+ GN APSR R
Sbjct: 119 ACGAPASRQADCKFNGNPAPSRFSR 143
>SB_31229| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 676
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 143 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 268
W C G +P P + DD+ +TF SET GK +
Sbjct: 509 WGALCDFLGTKPPRDEPFPH-VNKDDDALHTFQSETQLGKEI 549
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 209 GGGDDSFNTFFSETGAGKH 265
GGG FN FF+ G G H
Sbjct: 102 GGGGFDFNDFFNNFGHGDH 120
>SB_3658| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 138
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 102 YTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVP 278
Y+ + + S+MP ++ +TASNL L + + + P + A T P
Sbjct: 59 YSSCRDQYNSDMPTADQLSCNTASNLDSALNLMASDSTTSNSFSFTKCTPGDCAKTLPAS 118
Query: 279 SSS 287
+ S
Sbjct: 119 TCS 121
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = -2
Query: 52 DKIN*SVVVQRDQLS 8
D++N SVV+QRDQ+S
Sbjct: 128 DRVNQSVVLQRDQIS 142
>SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019)
Length = 1008
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 198 TRPSGVETTPSTRSSARPELASTFPVPSSS 287
T P G + PST + RP +A +P P +
Sbjct: 315 TTPQGWQQAPSTTAQVRPGVAG-YPTPQEA 343
>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2937
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 102 YTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVP 278
Y+ + + S+MP ++ +TASNL L + + + P + A T P
Sbjct: 1731 YSSCRDQYNSDMPTADQLSCNTASNLDSALNLMASDSTTSNSFSFTKCTPGDCAKTLPAS 1790
Query: 279 SSS 287
+ S
Sbjct: 1791 TCS 1793
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,063,784
Number of Sequences: 59808
Number of extensions: 203441
Number of successful extensions: 693
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 326952314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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