Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J23
(576 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 25 0.71
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.71
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 0.94
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 2.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 2.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.7
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 8.7
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 24.6 bits (51), Expect = 0.71
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 269 KDLHQACDLARGYAALA---LTGLLPAVLPDACVRCT 370
K LH C L RG+ + + LLP VL + C RCT
Sbjct: 35 KQLH--CILDRGHCDVIGKKIKELLPEVLNNHCNRCT 69
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 0.71
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 281 QACDLARGYAALALTGLLPAVLPDACV 361
Q +A A ALTG P +LP C+
Sbjct: 463 QVDPMAASVVAAALTGTYPTLLPQWCL 489
Score = 22.2 bits (45), Expect = 3.8
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 77 YSLARSCPKVQTPEHSHHQMHAALPPACEQVFGGISPL--RPI 199
YS RS + +HH+++ A +C+ V G + + RP+
Sbjct: 54 YSGTRSSESLTA--QAHHRLYPAFSSSCDPVPGNLEQIGSRPL 94
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 0.94
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +2
Query: 320 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQSNEQSYKDLVMP 499
+T L +LP V+ + Q V N+ ++ +T +QS + V+P
Sbjct: 959 VTTNLTTILPPVKVQSQQQSQQSQQQQQQQTIVTNQAGKSIL--QTANIKQQSPQQHVLP 1016
Query: 500 LITQLVDNLKSKQITDIKIYLAGH 571
T L +K IK L GH
Sbjct: 1017 GKTLLASQIKLVSPGQIKSLLTGH 1040
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 320 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 427
L +LP L C +CTD + I V + V NK
Sbjct: 64 LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 320 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 427
L +LP L C +CTD + I V + V NK
Sbjct: 64 LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 320 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 427
L +LP L C +CTD + I V + V NK
Sbjct: 64 LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 3.8
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 213 ISHHSDKRASTRCPEQTPLRTCTRPVTWREDTRRWP 320
+S H A RC T + +TW +D R+ P
Sbjct: 340 LSVHLGGNAEFRCEVSTHPQAGPHFITWYKDGRQLP 375
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 109 DSRALPPPDARCSA 150
D ++PP D RC+A
Sbjct: 1109 DVPSIPPEDVRCAA 1122
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 3.8
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 213 ISHHSDKRASTRCPEQTPLRTCTRPVTWREDTRRWP 320
+S H A RC T + +TW +D R+ P
Sbjct: 340 LSVHLGGNAEFRCEVSTHPQAGPHFITWYKDGRQLP 375
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 109 DSRALPPPDARCSA 150
D ++PP D RC+A
Sbjct: 1105 DVPSIPPEDVRCAA 1118
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 108 WTLGQLRARLYALPNSL 58
W LG L ++YA+ SL
Sbjct: 118 WVLGPLFCQIYAMLGSL 134
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 108 WTLGQLRARLYALPNSL 58
W LG L ++YA+ SL
Sbjct: 84 WVLGPLFCQIYAMLGSL 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,900
Number of Sequences: 438
Number of extensions: 3268
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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