Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J22
         (587 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   247   8e-66
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   247   8e-66
BT025177-1|ABE98143.1| 1084|Drosophila melanogaster AT27333p pro...    30   2.7  
AE014297-108|AAF52121.2| 1081|Drosophila melanogaster CG14651-PA...    30   2.7  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  247 bits (605), Expect = 8e-66
 Identities = 115/161 (71%), Positives = 126/161 (78%)
 Frame = +2

Query: 104 MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 283
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 284 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 463
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 464 VAQDSSYKYFEVILIDPSHNAIRRDPKINWIVNAVHKHREM 586
           +AQD+SYKYFEVILID  H+AIRRDPKINWI   VHKHRE+
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHREL 161


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  247 bits (605), Expect = 8e-66
 Identities = 115/161 (71%), Positives = 126/161 (78%)
 Frame = +2

Query: 104 MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 283
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 284 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 463
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 464 VAQDSSYKYFEVILIDPSHNAIRRDPKINWIVNAVHKHREM 586
           +AQD+SYKYFEVILID  H+AIRRDPKINWI   VHKHRE+
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHREL 161


>BT025177-1|ABE98143.1| 1084|Drosophila melanogaster AT27333p
           protein.
          Length = 1084

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
 Frame = -2

Query: 325 WAFTATTAHADSEDNITLLG-------TVSKPSRLVWPRGPGSAVHTSQLAILPHSYTQE 167
           W   A TAH +  D  TLL        TV K   +     P   +   Q A+        
Sbjct: 218 WGMAAVTAHHEDSDLWTLLSLEDGCTYTVPKLQFMFMAEDPHKYIKRLQAAV-------H 270

Query: 166 KSHNIAQLFPIQLLYISVRAHLDESVIDFSLVPI----HAARGSTVLERRHRGGVQLLF 2
           + H   QL  ++L+   V     ES + +S  PI     AA+ S   +RR R  V L+F
Sbjct: 271 ERHKGEQLMLMELIVDCVLHEDIESTVFYSFKPIESVLQAAKVSEQCKRRLRSEVNLVF 329


>AE014297-108|AAF52121.2| 1081|Drosophila melanogaster CG14651-PA
           protein.
          Length = 1081

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
 Frame = -2

Query: 325 WAFTATTAHADSEDNITLLG-------TVSKPSRLVWPRGPGSAVHTSQLAILPHSYTQE 167
           W   A TAH +  D  TLL        TV K   +     P   +   Q A+        
Sbjct: 215 WGMAAVTAHHEDSDLWTLLSLEDGCTYTVPKLQFMFMAEDPHKYIKRLQAAV-------H 267

Query: 166 KSHNIAQLFPIQLLYISVRAHLDESVIDFSLVPI----HAARGSTVLERRHRGGVQLLF 2
           + H   QL  ++L+   V     ES + +S  PI     AA+ S   +RR R  V L+F
Sbjct: 268 ERHKGEQLMLMELIVDCVLHEDIESTVFYSFKPIESVLQAAKVSEQCKRRLRSEVNLVF 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,364,137
Number of Sequences: 53049
Number of extensions: 558116
Number of successful extensions: 1290
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)