Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J18
         (416 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96NC0 Cluster: Zinc finger matrin-type protein 2; n=28...    38   0.083
UniRef50_Q5FHB1 Cluster: High-affinity zinc uptake system protei...    31   7.2  

>UniRef50_Q96NC0 Cluster: Zinc finger matrin-type protein 2; n=28;
           Eumetazoa|Rep: Zinc finger matrin-type protein 2 - Homo
           sapiens (Human)
          Length = 199

 Score = 37.9 bits (84), Expect = 0.083
 Identities = 23/54 (42%), Positives = 26/54 (48%)
 Frame = +2

Query: 254 TRPEDHRRKWDKDEFXXXXXXXXXXXXXXXXXXXXXXXPV*RELLRLREYKVDL 415
           T+  D RRKWDKDE+                       PV RELLR R+YKVDL
Sbjct: 7   TKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPVQ--PVKRELLRHRDYKVDL 58


>UniRef50_Q5FHB1 Cluster: High-affinity zinc uptake system protein
           znuA; n=4; canis group|Rep: High-affinity zinc uptake
           system protein znuA - Ehrlichia ruminantium (strain
           Gardel)
          Length = 287

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 138 FIRNHFALNYITNLSTSHSISGKLFSLYHLLKI 236
           +   +F LN+IT+LS+SH+ +  +  L H+ K+
Sbjct: 193 YFEKYFGLNFITSLSSSHNTNISVKKLTHIQKV 225


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,437,853
Number of Sequences: 1657284
Number of extensions: 3723343
Number of successful extensions: 6112
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6111
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)