Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J17
         (517 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499508 Cluster: hypothetical protein 492.t00006;...    32   6.8  
UniRef50_Q9PPR4 Cluster: Conserved hypothetical; n=1; Ureaplasma...    32   6.8  
UniRef50_Q2IZR0 Cluster: AAA_5 ATPase; n=1; Rhodopseudomonas pal...    32   6.8  
UniRef50_Q54BR4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_UPI0000499508 Cluster: hypothetical protein 492.t00006;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 492.t00006 - Entamoeba histolytica HM-1:IMSS
          Length = 193

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = -1

Query: 391 HEENKNTVKIFLLS-LQKLFSTHAKFQNPHKNRNKHTNRRPYNINXXXXLVNYLRIFHCL 215
           H EN NT  + L S L  L+  +++F+  + +           IN       +++ F+C 
Sbjct: 108 HIENCNTHNVELPSCLDSLYLHYSEFKITNPSIFYTLILNESKINEEMIQKEFIKNFYCK 167

Query: 214 REFVLKNSFIRYSWFISLPGSSLC 143
           R    ++ FI   W++SLP    C
Sbjct: 168 RS--KESEFINIEWYLSLPQVKFC 189


>UniRef50_Q9PPR4 Cluster: Conserved hypothetical; n=1; Ureaplasma
           parvum|Rep: Conserved hypothetical - Ureaplasma parvum
           (Ureaplasma urealyticum biotype 1)
          Length = 317

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 403 IFKHATKKN*RPVCLHLTQWDLTNIVNSKTLPIN 504
           I K+  K +   VC  L +WD+ N +NSK + +N
Sbjct: 177 IIKYNPKFHLHEVCTFLKEWDVKNFINSKRMLVN 210


>UniRef50_Q2IZR0 Cluster: AAA_5 ATPase; n=1; Rhodopseudomonas
           palustris HaA2|Rep: AAA_5 ATPase - Rhodopseudomonas
           palustris (strain HaA2)
          Length = 834

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = -1

Query: 466 SPIELSADRQAVNFF*LHV*K*CLNHEENKNTVKIFLLSLQKLFSTHAKFQNPHKNRNKH 287
           +P ++ AD+     F  H+ +     ++N N  ++F+L     +        P KNRN+ 
Sbjct: 173 APEQIGADQSPATIFRFHLDE-TFRADDNLNYARLFVL-----YDAEGAAFEPVKNRNRE 226

Query: 286 TNRRPYNI 263
           TNR  Y I
Sbjct: 227 TNRLAYRI 234


>UniRef50_Q54BR4 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1784

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256  INLCYKAFYL-YVYSYFYVDFETLHEY*TTFVVRVKIF*QCFYFLRGSNIIFKHATKKN* 432
            I++C +   + +++  +Y D E L    T     ++    CF FL+   I  KHA +   
Sbjct: 1368 ISVCIETIIVQHLFPEYYTDLECLFNILTILYSHIQDVQTCFLFLK--KISSKHAIES-- 1423

Query: 433  RPVCLHLTQWDLTNIVNSKTLPINE 507
             P   ++    + ++ NSK  PI E
Sbjct: 1424 -PTLANIILKSIIDMCNSKNSPITE 1447


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,659,507
Number of Sequences: 1657284
Number of extensions: 8477749
Number of successful extensions: 22021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21804
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)