Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J17
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1

Query: 238 SLLIIVINLCYKAFYLYVYSYFYVDFETLHE 330
           SLL +V   CY   ++Y+++ +Y+ + ++HE
Sbjct: 139 SLLQLVFVFCY---FIYLFTVYYI-YYSVHE 165


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 229 FANSLLIIVINLCYKAFYLYVYSYFYVDFETLHEY*TTFV 348
           F   +L   INL  +  Y +  +   V ++ L+EY  T V
Sbjct: 181 FMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLV 220


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 229 FANSLLIIVINLCYKAFYLYVYSYFYVDFETLHEY*TTFV 348
           F   +L   INL  +  Y +  +   V ++ L+EY  T V
Sbjct: 181 FMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLV 220


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 205 VLKNSFIRYSWFISLPGSSLCVPS 134
           +L N F R+  F+    S++ VP+
Sbjct: 246 ILVNGFGRFKHFVGADNSTVFVPT 269


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 125 GIP*RYAQ*RAWKRDKPRISDERVFKN 205
           G P R +  + W+ ++P  S+ R   N
Sbjct: 353 GFPKRSSDEQQWRNNQPSTSNNRWHNN 379


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 365 FNSVFIFFVVQTLFSNMQL 421
           FNSVFI  +++    N+Q+
Sbjct: 446 FNSVFICDLIEQKVKNIQM 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,175
Number of Sequences: 336
Number of extensions: 2468
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)