Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J17
         (517 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016019-1|AAV36904.1| 1218|Drosophila melanogaster RE16243p pro...    30   1.6  
AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched p...    30   1.6  
AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA ...    30   1.6  

>BT016019-1|AAV36904.1| 1218|Drosophila melanogaster RE16243p
           protein.
          Length = 1218

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 343 KLFSTHAKFQNPHKNRNKHTNRRPYN 266
           KL   H + +N HKNRNK+  R+  N
Sbjct: 102 KLHPNHRRRKNKHKNRNKNKRRKEQN 127


>AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched
           protein.
          Length = 1218

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 343 KLFSTHAKFQNPHKNRNKHTNRRPYN 266
           KL   H + +N HKNRNK+  R+  N
Sbjct: 102 KLHPNHRRRKNKHKNRNKNKRRKEQN 127


>AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA
           protein.
          Length = 1218

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 343 KLFSTHAKFQNPHKNRNKHTNRRPYN 266
           KL   H + +N HKNRNK+  R+  N
Sbjct: 102 KLHPNHRRRKNKHKNRNKNKRRKEQN 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,225,942
Number of Sequences: 53049
Number of extensions: 365210
Number of successful extensions: 831
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)