Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J17
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    25   0.61 
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    25   0.61 
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    25   0.61 
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    25   0.61 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   7.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   10.0 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   10.0 

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 388 EENKNTVKIFLLSLQKLFSTHAKFQNPHKNRNKHTNRRPYNIN 260
           E +K    I  LS    +S +  + N + N N +   + YNIN
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 388 EENKNTVKIFLLSLQKLFSTHAKFQNPHKNRNKHTNRRPYNIN 260
           E +K    I  LS    +S +  + N + N N +   + YNIN
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 388 EENKNTVKIFLLSLQKLFSTHAKFQNPHKNRNKHTNRRPYNIN 260
           E +K    I  LS    +S +  + N + N N +   + YNIN
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 388 EENKNTVKIFLLSLQKLFSTHAKFQNPHKNRNKHTNRRPYNIN 260
           E +K    I  LS    +S +  + N + N N +   + YNIN
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/26 (23%), Positives = 16/26 (61%)
 Frame = +2

Query: 266 VIRPSICMFIPIFMWILKLCMSTKQL 343
           +++ ++C  IPI +  L   +S +++
Sbjct: 222 ILKKTVCFVIPIMLLFLAFFVSFRKI 247


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 299 IFMWILKLCMSTKQLL 346
           I +W+L LC++  Q +
Sbjct: 176 IVIWLLALCLAVPQAI 191


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 349 VRVKIF*QCFYFLRGSNI 402
           +R+KI   C+Y + G+ I
Sbjct: 315 LRIKILGDCYYCISGAPI 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,882
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)