Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J16
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.32
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 30 0.73
Z75550-1|CAA99921.1| 183|Caenorhabditis elegans Hypothetical pr... 29 1.3
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 29 1.7
U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical ... 29 2.2
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 28 2.9
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 28 2.9
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 2.9
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 28 3.9
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 28 3.9
U88170-10|AAB42242.2| 340|Caenorhabditis elegans Serpentine rec... 27 5.1
AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arr... 27 5.1
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 27 9.0
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 27 9.0
Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical pr... 27 9.0
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 27 9.0
U13019-15|AAK84567.2| 317|Caenorhabditis elegans Serpentine rec... 27 9.0
AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical ... 27 9.0
AF016431-2|AAC24249.2| 148|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical
protein R04B5.3 protein.
Length = 387
Score = 31.5 bits (68), Expect = 0.32
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 109 IQDEKITKSHKDNKCHNDLLPKL--EELIERVQLLSWALQQNIIDTHVNFTVTKSLEQIN 282
I K+ K K + ND KL E IE L + + + H T+ +I+
Sbjct: 257 IDGTKLAKLFKPSLEQNDNFHKLLKSEKIEMYDFLVFVVL--LFWDHGIVGQTEECREIS 314
Query: 283 YKNRKGNITSEYIKYLDEIKLHEEKIENVTEEFKIL 390
K K N+T+EYI YL I+ +E + +T IL
Sbjct: 315 -KKMKSNVTNEYIYYLKYIQKNENPVCQLTMLVSIL 349
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 30.3 bits (65), Expect = 0.73
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +1
Query: 166 LPKLEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQIN---YKNRKGNITSEYIKYLD- 333
+ + ELI+RV LQQ I K + Q+ +K + E +K+L
Sbjct: 817 IQEANELIDRVH----DLQQTIEHKSARIQEVKKMSQVPEFVHKMEEVEHVQEQLKHLTV 872
Query: 334 --EIKLHEEKIENVTEEFKILKDKLYKSYSMFEN 429
E KL ++K+ VTE ++ ++++ + MF++
Sbjct: 873 ELEEKLEQQKLVKVTEHIQMWQEEMIEIIKMFDS 906
>Z75550-1|CAA99921.1| 183|Caenorhabditis elegans Hypothetical
protein T22C1.2 protein.
Length = 183
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +1
Query: 160 DLLPKLEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQINYKNRKGNITSEYIKYLDEI 339
+ L K+ + ++ +S L Q I H + +K ++ I+Y ++ G +E I+
Sbjct: 83 EFLQKVMQSLDEPDKIS-KLCQEIGQKHAKYRRSKGMK-IDYWDKLGEAITETIREYQGW 140
Query: 340 KLHEEKIENVTEEFKILKDKLYKSYS 417
K+H E + T + D+L YS
Sbjct: 141 KIHRESLRAATVLVSYVVDQLRFGYS 166
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1
Query: 52 KFFYTKP*DNVKNMSLNANI-QDEKITKSHKDN--KCHNDLLPKLEEL 186
K FY N KN ++ N Q+EKI + +K N + HND++ +LEEL
Sbjct: 144 KLFY----QNRKNKKMSQNDEQNEKIIEKNKLNGDQDHNDVMNRLEEL 187
>U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical
protein F01G12.6 protein.
Length = 466
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 82 VKNMSLNANIQDEKITKSHKDNKC---HNDLLPKLEELIERVQLLSWALQQNIIDTHVNF 252
VK A + I +H+ NK ++D+ KLE E ++ LS A + NI+DT
Sbjct: 45 VKGQVNLAQEAENYINIAHELNKLRDMNSDVHRKLEGAYETIRELSSARRDNIMDTGTQV 104
Query: 253 TVTKSLEQIN 282
T +E I+
Sbjct: 105 DDTSMIEHIH 114
>AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical
protein C09D4.2 protein.
Length = 254
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 223 QNIIDTHVNFTVTKSLEQINYKNRKGNITSEYIKY 327
QNI+D V K++ I+ N+K +I S+Y+K+
Sbjct: 25 QNIVDFSVK-DFNKNINSIDILNKKWDIVSKYVKF 58
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 166 LPKLEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQINYKNRKGNITSEYIKYLDEIKL 345
L LEE+ ++VQ L+ + ++T F+V + YKN K S IK + +
Sbjct: 325 LQDLEEMNKKVQTLTQENSKLRLETQTFFSVDSIVNSEEYKNLK-KYYSLAIKEYERVSK 383
Query: 346 HEEKIENVTEEFKILKD 396
E I + F+ K+
Sbjct: 384 DLEDITTERDAFRSAKE 400
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 166 LPKLEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQINYKNRKGNITSEYIKYLDEIKL 345
L LEE+ ++VQ L+ + ++T F+V + YKN K S IK + +
Sbjct: 325 LQDLEEMNKKVQTLTQENSKLRLETQTFFSVDSIVNSEEYKNLK-KYYSLAIKEYERVSK 383
Query: 346 HEEKIENVTEEFKILKD 396
E I + F+ K+
Sbjct: 384 DLEDITTERDAFRSAKE 400
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/99 (21%), Positives = 46/99 (46%)
Frame = +1
Query: 106 NIQDEKITKSHKDNKCHNDLLPKLEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQINY 285
N+ + K + HK ND+L + E IE++ + L+ + + T++ + +Y
Sbjct: 912 NVLERKYNEQHKKVMKMNDVLREYERKIEQLNMEKTDLE----NENQKLRETQNRQDSHY 967
Query: 286 KNRKGNITSEYIKYLDEIKLHEEKIENVTEEFKILKDKL 402
N + + E +DE++ +K+ + E ++ KL
Sbjct: 968 SNLEKEV-MEKSSLIDELQNQIQKLSDENNEQRLTIAKL 1005
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical
protein F26A3.8 protein.
Length = 1601
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 151 CHNDLLPKLEELIERVQLLSWALQQN 228
CH + ++EEL++R Q+LS+A Q N
Sbjct: 762 CHKRITSRIEELMDR-QILSFAKQMN 786
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 88 NMSLNANIQDEKITKSHKDNKCHNDLLPKLEELIERVQLLSWALQQ--NIIDTHVNFTVT 261
N LN NI + + + D+ ++ + + +V+ + L++ ++ VN +
Sbjct: 4 NECLNTNINPNSLKVDKELTQMARDISTRMNQRMTQVERKANDLEKFSRLVALRVNSAAS 63
Query: 262 KSLEQINYKNRKGNITSEYIKYLDEIKLHEEKIENVTEEF 381
+ N+K + I+++ I +++++ K T+EF
Sbjct: 64 RMANLKNHKAVRQVISTQNIPNSEDMRVDSRKSSGFTQEF 103
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 157 NDLLPKLEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQINYKNR-KGNITSEYIKYLD 333
+D+L +++ +E QQ I T++ T+ ++IN + + ++ + K D
Sbjct: 306 DDVLTLIDKAVEDNARSDQVKQQQIQITNLERTIRVLNDKINCNDVFRSDVEEKLDKLKD 365
Query: 334 EIKLHEEKIENVTEEFKILKDKL 402
+I E +I EE +KD L
Sbjct: 366 DISSREREINAQKEEVNRIKDSL 388
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 151 CHNDLLPKLEELIERVQLLSWALQQN 228
CH + ++EEL++R Q+LS+A Q N
Sbjct: 762 CHKRITSRIEELMDR-QILSFAKQMN 786
>U88170-10|AAB42242.2| 340|Caenorhabditis elegans Serpentine
receptor, class h protein50 protein.
Length = 340
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -2
Query: 410 DLYSLSFNILNSSVTFSIFSSCNLISSKYFMYSDVMLPLRFL*FIC 273
+ Y+ ++ NSS F+IF++ +S + ++LP+ FL F C
Sbjct: 3 EYYTTNYTKCNSS--FTIFATPEFLSISSKIEFSIILPINFLGFYC 46
>AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arrest
at two-fold protein6 protein.
Length = 375
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 334 EIKLHEEKIENVTEEFKILKD 396
+++ HEEK++NV FK+++D
Sbjct: 320 QVQSHEEKVKNVQFAFKLMED 340
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 223 QNIIDTHVNFTVTKSLEQINYKNRKGNITSEY-IKYLDEIKLHEEKIENVTEEFKILKDK 399
+NI VN V + + + N K R+G + Y IK KL E K++ + ++ D+
Sbjct: 1136 ENIYVKLVNLNVEEDIAKANGKARRGRAKNLYAIKMSSTNKLMELKVQLYDKTHQLPNDQ 1195
Query: 400 L 402
L
Sbjct: 1196 L 1196
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 223 QNIIDTHVNFTVTKSLEQINYKNRKGNITSEY-IKYLDEIKLHEEKIENVTEEFKILKDK 399
+NI VN V + + + N K R+G + Y IK KL E K++ + ++ D+
Sbjct: 1136 ENIYVKLVNLNVEEDIAKANGKARRGRAKNLYAIKMSSTNKLMELKVQLYDKTHQLPNDQ 1195
Query: 400 L 402
L
Sbjct: 1196 L 1196
>Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical
protein E04D5.3 protein.
Length = 507
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 162 FVTKIGRTYRTSATVVLGITTKHN 233
F+TKI R YR S V G HN
Sbjct: 117 FITKIDRAYRVSCFYVEGTKKVHN 140
>Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical
protein C36E8.4 protein.
Length = 548
Score = 26.6 bits (56), Expect = 9.0
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +1
Query: 175 LEELIERVQLLSWALQQNIIDTHVNFTVTKSLEQINYKNRKGNITSEYIKYLDEIKLHEE 354
L+++ R+ L+ +++ I N + + N IT + I+ L I+ +++
Sbjct: 88 LKKISIRLHKLTQSVESGIDKGWTNVAEQFDIHATIHSNLGSAITEDIIQPLRSIQSNQQ 147
Query: 355 KI----ENVTE-EFKILKDKLYKSYSMFENLCVLAQ 447
K +N E E + LKDK ++ M +L VLA+
Sbjct: 148 KTIRAADNFVEREIRKLKDKKDETQKMKRSLYVLAK 183
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = -1
Query: 321 YVFRCNVTFTIFIIYLFKTFCYCKIDVSVDYVLL*CPRQQLHSFYKFFQFW*QIIVTFII 142
Y+FR + I L C+ I +++ RQQ + K + Q++ T +I
Sbjct: 190 YIFRIFDAISYLICSLIIFICFSTICFCTSQIMMKQKRQQQYMSEKTKEMNKQLLKT-MI 248
Query: 141 FMRLSNFLVLYIRI 100
F + F ++YI +
Sbjct: 249 FQTIFPFFMMYITV 262
>U13019-15|AAK84567.2| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 5 protein.
Length = 317
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -1
Query: 297 FTIFIIYLFKTFCYCKIDVSVDYVLL*CPRQQ-LHSFYKFFQFW*QIIVTFIIFMRLSNF 121
+ +F +F + Y + S+ + L R + + ++ Q W + I I F+ LS F
Sbjct: 98 YVLFPNIIFSIYNYMRAAKSIIQIFLTVNRMTCVLAPLRYSQIWRRFIPVTIAFITLSPF 157
Query: 120 LVLYIRI*THIFHVVLW 70
LV++ I + F V ++
Sbjct: 158 LVIWNVIISETFPVSIF 174
>AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical
protein C46E10.2 protein.
Length = 123
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 195 SFYKFFQFW*QIIVTFIIFMRLSNFL 118
SFY F F Q+ + F+IF +L FL
Sbjct: 17 SFYAIFGFTFQLTLIFLIFQKLPVFL 42
>AF016431-2|AAC24249.2| 148|Caenorhabditis elegans Hypothetical
protein C10B5.3 protein.
Length = 148
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 319 IKYLDEIKLHEEKIENVTEEF 381
I+ LD++ LHE + NVT E+
Sbjct: 54 IRQLDDVILHETSVANVTSEW 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,733,323
Number of Sequences: 27780
Number of extensions: 185030
Number of successful extensions: 787
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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