Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J15
         (467 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4A6X5 Cluster: Putative uncharacterized protein; n=2; ...    38   0.083
UniRef50_Q6BS70 Cluster: Similar to CA3486|IPF3206 Candida albic...    33   3.1  
UniRef50_Q5A6N8 Cluster: Oligosaccharide translocation protein R...    33   3.1  
UniRef50_Q9LVD4 Cluster: Oxysterol-binding protein-like; n=7; ro...    32   5.4  
UniRef50_Q4UKW8 Cluster: Proline/betaine transporter; n=9; Ricke...    32   7.2  
UniRef50_A4XM26 Cluster: Metal-dependent hydrolase of the beta-l...    32   7.2  
UniRef50_Q98PU3 Cluster: ABC TRANSPORTER ATP-BINDING AND PERMEAS...    31   9.5  
UniRef50_Q6BY14 Cluster: Debaryomyces hansenii chromosome A of s...    31   9.5  

>UniRef50_Q4A6X5 Cluster: Putative uncharacterized protein; n=2;
           Mycoplasma synoviae 53|Rep: Putative uncharacterized
           protein - Mycoplasma synoviae (strain 53)
          Length = 426

 Score = 38.3 bits (85), Expect = 0.083
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +1

Query: 184 YKKTQEILQSFLNYLS-KVTILIVIIEYLICDIQKLKKTEVSRIIRVASIFN*YHNIAPL 360
           YKK +++L++  N+L  K + L    +Y++ D    K+ E++ +     ++N +  I   
Sbjct: 112 YKKKEKVLKNIQNFLKIKSSDLYKKSKYMLMDFFLTKEVEINSLFIHDDLYNLFREIILF 171

Query: 361 KNHRNPHNYVMKRKTLTY 414
            NH NP  + ++  T  +
Sbjct: 172 YNHWNPKGFFIENSTALF 189


>UniRef50_Q6BS70 Cluster: Similar to CA3486|IPF3206 Candida albicans
           IPF3206 unknown function; n=1; Debaryomyces
           hansenii|Rep: Similar to CA3486|IPF3206 Candida albicans
           IPF3206 unknown function - Debaryomyces hansenii (Yeast)
           (Torulaspora hansenii)
          Length = 397

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +1

Query: 58  LNILN*TRYVIFINTTLKHYFE*YVPIQCLLNYL-SCDNDFFVYKKTQEILQSFLNYLSK 234
           L ++N +  +I I +  K+Y         LLNYL S   +  + KK  ++   +  YLS 
Sbjct: 197 LKLINLSYDIIVILSITKNY-------HTLLNYLESIRYELVLQKKQNQLSDMYRQYLSN 249

Query: 235 VTILIVIIEYLICDIQKLKKTEVSRII 315
           VT+L VII  ++      KK  ++ II
Sbjct: 250 VTLLWVIILIMVYVRNGTKKDRLTDII 276


>UniRef50_Q5A6N8 Cluster: Oligosaccharide translocation protein
           RFT1; n=1; Candida albicans|Rep: Oligosaccharide
           translocation protein RFT1 - Candida albicans (Yeast)
          Length = 561

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 22/80 (27%), Positives = 41/80 (51%)
 Frame = +1

Query: 97  NTTLKHYFE*YVPIQCLLNYLSCDNDFFVYKKTQEILQSFLNYLSKVTILIVIIEYLICD 276
           +T +   F  YV     L +       F    T   L++F  +++ +TIL++I  YL+ D
Sbjct: 387 STDIFKLFPQYVVYLPFLAFNGILEALFSSMATNSDLKNFSKFMTLITILVLIFSYLLID 446

Query: 277 IQKLKKTEVSRIIRVASIFN 336
           +  L+   +S +I +A++FN
Sbjct: 447 VLNLR---ISGLI-LANVFN 462


>UniRef50_Q9LVD4 Cluster: Oxysterol-binding protein-like; n=7;
           rosids|Rep: Oxysterol-binding protein-like - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 379

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 300 GKSHYTSRQHLQLIS*YCPIKKPSKSPQLCHEKKNVDVLL 419
           G++H+ S  H+ +++       P  +    HEK+NVDVLL
Sbjct: 114 GETHHVSNGHINVLAEQISHHPPVSALHATHEKENVDVLL 153


>UniRef50_Q4UKW8 Cluster: Proline/betaine transporter; n=9;
           Rickettsia|Rep: Proline/betaine transporter - Rickettsia
           felis (Rickettsia azadi)
          Length = 280

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +1

Query: 133 PIQCLLNYLSCDN---DFFVYKKTQEILQSFLNYLSKVTILIVIIEYLICDIQKLKKTEV 303
           P+   + Y+ C N   + F Y   Q I Q+F+   +++ I  +I+ YL+C I  LK  +V
Sbjct: 103 PLWFYIVYIYCGNMLKNSFNYSAAQVIHQNFIVCGTEL-ISTIIVTYLVCKIHPLKVLKV 161

Query: 304 SRII 315
             II
Sbjct: 162 RLII 165


>UniRef50_A4XM26 Cluster: Metal-dependent hydrolase of the
           beta-lactamase superfamily III-like protein; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Metal-dependent hydrolase of the beta-lactamase
           superfamily III-like protein - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 243

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +1

Query: 145 LLNYLSCDNDFFVYKKTQEILQSFLNYLSKVTIL 246
           LL+Y+   ND ++ K  Q+    F+NYLSK+T++
Sbjct: 101 LLDYMGIRNDIYILKTPQD----FVNYLSKLTVI 130


>UniRef50_Q98PU3 Cluster: ABC TRANSPORTER ATP-BINDING AND PERMEASE
           PROTEIN; n=3; Mycoplasma pulmonis|Rep: ABC TRANSPORTER
           ATP-BINDING AND PERMEASE PROTEIN - Mycoplasma pulmonis
          Length = 640

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = +1

Query: 127 YVPIQCLLNYLSCDNDFFVYKKTQEILQSFLNYLSKVTILIVIIEYLICDIQKLKKTEVS 306
           + P Q L NY+    +FF     Q+I   F  + S V  +I+II YL+    KL K EVS
Sbjct: 579 FEPSQLLFNYVLKVREFFSPSLNQKIAAIFAAW-SIVNSIIIII-YLVAS-YKLLKIEVS 635

Query: 307 RIIR 318
           ++ +
Sbjct: 636 KLFK 639


>UniRef50_Q6BY14 Cluster: Debaryomyces hansenii chromosome A of
           strain CBS767 of Debaryomyces hansenii; n=4;
           Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
           A of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 785

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 178 FVYKKTQEILQSFLNYLSKVTILIVI-IEYLICDIQKLKK 294
           F  K T+ I  S+LN L  VT L +I +E ++ DIQ LKK
Sbjct: 554 FCDKLTELITISYLNSLKLVTPLSIINVEQIMSDIQNLKK 593


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,129,045
Number of Sequences: 1657284
Number of extensions: 7204363
Number of successful extensions: 13967
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13962
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)