Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J15
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   4.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   9.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 382 CGDFDGFLMGQ 350
           C D DGFL GQ
Sbjct: 29  CSDNDGFLPGQ 39


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 197 CVFLYTKKSLSQLR*FSRHC 138
           C F Y+KK +  L  F + C
Sbjct: 2   CYFNYSKKDIRSLSFFYKIC 21


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 197 CVFLYTKKSLSQLR*FSRHC 138
           C F Y+KK +  L  F + C
Sbjct: 2   CYFNYSKKDIRSLSFFYKIC 21


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 90  YDVPSLIKYV 61
           YDVP+L KY+
Sbjct: 190 YDVPALSKYL 199


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 90   YDVPSLIKYV 61
            YDVP+L KY+
Sbjct: 1998 YDVPTLSKYL 2007


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 208 VRSPVSSYIQKNHYHN*DNLVDIVSAHIIR 119
           V    S++      HN D LVD+    IIR
Sbjct: 305 VHKKCSNFTLPEIQHNLDVLVDMCEQDIIR 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,910
Number of Sequences: 336
Number of extensions: 2097
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)