Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J15
         (467 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113520-1|AAM29525.1|  378|Drosophila melanogaster RE60063p pro...    27   9.6  
AE013599-22|EAA45988.2|  378|Drosophila melanogaster CG17883-PA,...    27   9.6  

>AY113520-1|AAM29525.1|  378|Drosophila melanogaster RE60063p
           protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +1

Query: 136 IQCLLNYLSCDNDFFVYKKTQEILQSFLNYLSKVTILIVIIEYLICDIQKLKKTEVSRII 315
           + CLL+ +  D  F    KT     S LN  S +T++   +E LIC  ++ +KT+ + I+
Sbjct: 269 VHCLLSVIPEDLPFEDLLKTSS---SLLNKYS-LTLIEKDVEELICQERRKRKTDEALIV 324

Query: 316 R 318
           +
Sbjct: 325 K 325


>AE013599-22|EAA45988.2|  378|Drosophila melanogaster CG17883-PA,
           isoform A protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +1

Query: 136 IQCLLNYLSCDNDFFVYKKTQEILQSFLNYLSKVTILIVIIEYLICDIQKLKKTEVSRII 315
           + CLL+ +  D  F    KT     S LN  S +T++   +E LIC  ++ +KT+ + I+
Sbjct: 269 VHCLLSVIPEDLPFEDLLKTSS---SLLNKYS-LTLIEKDVEELICQERRKRKTDEALIV 324

Query: 316 R 318
           +
Sbjct: 325 K 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,076,042
Number of Sequences: 53049
Number of extensions: 327522
Number of successful extensions: 600
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)