Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J15
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   5.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   5.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 309 ATYLRLL*FLNITN*VFDYYNKY 241
           +T LR   F +I   + DYY+KY
Sbjct: 409 STSLRDPVFFSIYKTILDYYHKY 431


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 306 SHYTSRQHLQ 335
           +HYTS QHL+
Sbjct: 121 NHYTSHQHLR 130


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 309 ATYLRLL*FLNITN*VFDYYNKY 241
           +T LR   F +I   + DYY+KY
Sbjct: 409 STSLRDPVFFSIYKTILDYYHKY 431


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 309 ATYLRLL*FLNITN*VFDYYNKY 241
           +T LR   F +I   + DYY+KY
Sbjct: 35  STSLRDPVFFSIYKTILDYYHKY 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,848
Number of Sequences: 438
Number of extensions: 2404
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)