Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J14
(439 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 74 4e-14
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 65 2e-11
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 44 7e-05
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 42 2e-04
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907... 39 0.002
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 32 0.23
01_01_0061 + 483116-483757,483891-484046,484171-484262,484410-48... 29 1.2
01_07_0117 + 41171919-41172395 29 2.2
06_03_0361 + 19877324-19877718,19877821-19878067 28 2.9
04_04_0746 + 27726736-27727118,27727518-27727544,27728042-277281... 28 2.9
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 28 2.9
05_01_0212 + 1601861-1603600 28 3.8
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758 27 5.0
11_01_0430 + 3294482-3295299,3296038-3296386 27 6.6
09_04_0749 + 19919367-19920869 27 6.6
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 27 6.6
07_03_0318 - 16721615-16722154 27 6.6
01_02_0054 - 10677564-10677671,10679605-10680264 27 6.6
11_05_0009 - 18349593-18350477 27 8.7
11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331... 27 8.7
05_06_0021 - 24986483-24986726,24986764-24986906,24987361-24987423 27 8.7
03_05_0803 + 27829438-27829461,27829558-27829643,27829960-278300... 27 8.7
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 74.1 bits (174), Expect = 4e-14
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +3
Query: 69 ITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKYSLERKTF 248
ITFE+VR+P N+L+GEG GF+IA G R G A+R ++ + +L R TF
Sbjct: 625 ITFENVRVPATNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTF 684
Query: 249 GVPIAKHQAVAFMLADMAIGVETARLAWQKSAWMVD-HGQKNT-VVASVAKCHASEIANK 422
G IA+H + LA + +E ARL ++A +D HG K + ++AK A +A K
Sbjct: 685 GKKIAQHGSFLADLAKCRVELEQARLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALK 744
Query: 423 V 425
V
Sbjct: 745 V 745
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 65.3 bits (152), Expect = 2e-11
Identities = 35/90 (38%), Positives = 47/90 (52%)
Frame = +3
Query: 9 GVNPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGAT 188
G + +K +G R SDT + FE+ +P ENVL EG G + M D R +AAG
Sbjct: 220 GFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLDLERLVLAAGPI 279
Query: 189 GLAQRALHEATKYSLERKTFGVPIAKHQAV 278
GL Q L A Y +R+ FG PI + Q +
Sbjct: 280 GLMQACLDVAVPYVRQREQFGRPIGEFQFI 309
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 43.6 bits (98), Expect = 7e-05
Identities = 36/141 (25%), Positives = 58/141 (41%)
Frame = +3
Query: 9 GVNPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGAT 188
G+ + E +G R I F V +P+E+ L G + F+ +R VA
Sbjct: 233 GLKATKIENKIGLRMVQNGDIVFNKVFVPEEDRLPGVNS-FQDISKVLAISRVMVAWQPI 291
Query: 189 GLAQRALHEATKYSLERKTFGVPIAKHQAVAFMLADMAIGVETARLAWQKSAWMVDHGQK 368
G++ +Y ERK FGVP+ Q L M ++ L + + + G+
Sbjct: 292 GISMGVFDVCHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKM 351
Query: 369 NTVVASVAKCHASEIANKVAS 431
AS+ K S +A +V S
Sbjct: 352 TPGHASLGKGWTSRMAREVVS 372
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 41.9 bits (94), Expect = 2e-04
Identities = 36/141 (25%), Positives = 57/141 (40%)
Frame = +3
Query: 9 GVNPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGAT 188
G+ + E +G R I V +P E+ L G + F+ +R VA
Sbjct: 210 GLKCTKIENKIGLRMVQNADIVLNKVFVPDEDRLTGINS-FQDINKVLAMSRIMVAWQPI 268
Query: 189 GLAQRALHEATKYSLERKTFGVPIAKHQAVAFMLADMAIGVETARLAWQKSAWMVDHGQK 368
G++ +Y ERK FGVP+A Q L M ++ L + + + G+
Sbjct: 269 GISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKM 328
Query: 369 NTVVASVAKCHASEIANKVAS 431
AS+ K S+ A +V S
Sbjct: 329 TPGHASLGKAWTSKKAREVVS 349
>06_02_0285 +
13789900-13790071,13790407-13790525,13790642-13790751,
13790887-13791046,13791407-13791483,13792299-13792470,
13792580-13792672,13793617-13793733
Length = 339
Score = 39.1 bits (87), Expect = 0.002
Identities = 35/141 (24%), Positives = 58/141 (41%)
Frame = +3
Query: 9 GVNPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGAT 188
G+ + E R I EDV +P ++ L G + F+ + A + VA +
Sbjct: 143 GLKISKIENKTSLRVVQNCDILLEDVFVPDDDRLPGANS-FQDLVKALSFSCVIVAWISI 201
Query: 189 GLAQRALHEATKYSLERKTFGVPIAKHQAVAFMLADMAIGVETARLAWQKSAWMVDHGQK 368
G+A +Y ERK FG P+A Q L M ++ L + + D G+
Sbjct: 202 GIAAGVYDACLRYLGERKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRM 261
Query: 369 NTVVASVAKCHASEIANKVAS 431
T AS+ K ++ A + +
Sbjct: 262 TTGQASLGKAWITKQARETVA 282
>03_05_1071 +
30133696-30133874,30134294-30135200,30135224-30135358,
30135545-30136553,30136699-30136703
Length = 744
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 78 EDVRIPKEN-VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKYSLERK 242
+DV + E +L G GA +A G D T PVA+G G LH +SLE++
Sbjct: 351 DDVIVSAEGAILAGSGAIIALADGKGDSTAGPVASGTGGNVLSLLH-GNLHSLEQQ 405
>01_01_0061 +
483116-483757,483891-484046,484171-484262,484410-485076
Length = 518
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 151 KAPIAILNPAPSPINTFSLGILTSSNVIPRVSEAR 47
+ P+ PAPSP + + + SS+V+PR++ ++
Sbjct: 160 RTPVKERPPAPSPARSTASSLRKSSSVLPRITRSK 194
>01_07_0117 + 41171919-41172395
Length = 158
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 190 PVAPAATGGRVLSKAPIAILNPAPS 116
P P GGR + AP A+L PAP+
Sbjct: 44 PTGPGHGGGRHAAPAPAAVLPPAPA 68
>06_03_0361 + 19877324-19877718,19877821-19878067
Length = 213
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 84 VRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRAL 209
VR V++ GA +MGA+++ P AAG G +RAL
Sbjct: 110 VREEAVRVVVARGASMGWSMGAWEEAEPHAAAGGRG--RRAL 149
>04_04_0746 +
27726736-27727118,27727518-27727544,27728042-27728126,
27729252-27729809
Length = 350
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -1
Query: 346 QADFCQARRAVSTPIAISASMNATAWCFAIGTPNVLRSREYLVASWRARCANPVAPAATG 167
+A + + RRA + +AIS + + + + N L + ++ R RC+NP G
Sbjct: 132 KAIYLRRRRAGTVAVAISYHIISVTVEYQM-LINKLEKTDGVIVGER-RCSNPSGKKQQG 189
Query: 166 GRVLSKAPIAILNPAPSPINT 104
GRV S + + P P+ +
Sbjct: 190 GRVRSSSAQQMAPIRPKPLGS 210
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 196 ANPVAPAATGGRVLSKAPIA-ILNPAPSPINT 104
+NP PAA L+ AP A NP P+P +T
Sbjct: 23 SNPAPPAAAAAETLAPAPPAPNPNPTPTPAST 54
>05_01_0212 + 1601861-1603600
Length = 579
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 196 ANPVAPAATGGRVLSKAPIAILNPAPSPINTFSLGILTSSNVIPRVSEAR*PIFCSLR-P 20
A P+ AA GG + A +L A + ++ S L + +++PR + A I L+ P
Sbjct: 86 ATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLRAGDLLPRATAAEKAIRLLLKSP 145
Query: 19 GLTP 8
++P
Sbjct: 146 AVSP 149
>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
Length = 223
Score = 27.5 bits (58), Expect = 5.0
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -1
Query: 331 QARRAVSTPIAISASMNATAWCFAIGTPNVLRSREYLVASWRARCANPVAPAATGGRVLS 152
+AR S+P + S S A + +P S S +R +P+A TG
Sbjct: 40 RARAGPSSPSSSSPSTPTAAGLSFLSSPGSSASPNPAPRSRSSR-RSPLASPRTGTASPL 98
Query: 151 KAPIAILNPAPSPIN--TFSLGILTSS 77
A +A PAPSP + S+G L SS
Sbjct: 99 SAAVAPGGPAPSPASAAVSSVGDLRSS 125
>11_01_0430 + 3294482-3295299,3296038-3296386
Length = 388
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 304 IAISASMNATAWCFAIGTPNVLRSREYLVASWRARCANPVAPAAT 170
+A++AS C AI R R +V R RC P++ AAT
Sbjct: 10 VAVAASAAILFPCLAIAFFCRHRHRHRVVVKPRCRCLQPLSSAAT 54
>09_04_0749 + 19919367-19920869
Length = 500
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 244 VLRSREYLVASWRARCANPVAPAA 173
V + EY+ A+W AR P P+A
Sbjct: 249 VAQEAEYMAATWGARTIGPTVPSA 272
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 244 VLRSREYLVASWRARCANPVAPAATGGRVLSKAPIAILNPAPSPINTFSLGI 89
V+R RE L + AR A A + G VLS+ + L PAP+ + G+
Sbjct: 133 VVRRREALRSVRVARAAGSAAGSGDGAGVLSRLIRSNLAPAPAVDGAAATGV 184
>07_03_0318 - 16721615-16722154
Length = 179
Score = 27.1 bits (57), Expect = 6.6
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = -1
Query: 328 ARRAVSTPIAISASMNATAWCFAIGTPNVLRSREYLVASWRARCANPVAPAATGGRVLSK 149
A AV+ A A+ ATA A G +V A A APA T +V
Sbjct: 60 AATAVTGATAPMAAHGATAATAAPGATSVTTGLHEYHAPGMVATAGAPAPAGTADKV--- 116
Query: 148 APIAILNPAPSPINTFSLGILTSS 77
AP+ PA SP + G S+
Sbjct: 117 APLGTPAPAVSPAAAGTAGTAASA 140
>01_02_0054 - 10677564-10677671,10679605-10680264
Length = 255
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 217 ASWRARCANPVAPAATGGR 161
A RARC P AP ATG R
Sbjct: 132 AQLRARCPPPAAPPATGRR 150
>11_05_0009 - 18349593-18350477
Length = 294
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 438 PHPKRPYSRSRMRGISPPKLQLCSFDHDRPSRRISAKRDELFRLRLPYR 292
P+P RP RS R +SP + + D P+RR + L + R+ ++
Sbjct: 75 PNPSRP--RSATRSLSPRHVTKTTIWRDSPARRPTTGELGLLKARILFQ 121
>11_01_0432 +
3313060-3313107,3313610-3313753,3314510-3314662,
3315283-3315792,3315888-3317423,3317505-3317573,
3317742-3317807,3318517-3318640,3319464-3319690
Length = 958
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 320 SCFDSDCHIGEHECDSLVFRD-WNAERFTF*GIFSSFVE 207
+C DS IG+ D+LV+ D E F F G F +E
Sbjct: 9 ACLDSIRQIGDEIADALVYLDAGTLEAFQFIGAFPLLLE 47
>05_06_0021 - 24986483-24986726,24986764-24986906,24987361-24987423
Length = 149
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 363 QKNTVVASVAKCHASEIA 416
+KNTVV S+A C SE+A
Sbjct: 44 EKNTVVVSIADCPDSELA 61
>03_05_0803 +
27829438-27829461,27829558-27829643,27829960-27830088,
27830806-27830925,27831007-27831132,27831349-27831433,
27831538-27831648,27832215-27832308,27832448-27832728,
27832840-27832947,27833163-27833284,27833825-27834035,
27834149-27834376,27834591-27834680
Length = 604
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 247 NVLRSREYLVASWRARCANPVAPAATGGRVLSKAPIAILNP 125
+V SREY+ W C N T G ++ + P L+P
Sbjct: 397 HVFLSREYVQPQWIYDCVNARIILPTEGYIVGRVPPPHLSP 437
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,398,169
Number of Sequences: 37544
Number of extensions: 287569
Number of successful extensions: 914
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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