Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J12
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.49 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   0.86 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.86 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.1  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 358 CHHHRRSWTQRFHQEHDHWNVSS 426
           C  HR    + FH+EHD    SS
Sbjct: 251 CDDHRDRPPRHFHEEHDTRRASS 273


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 248 PFPGLPSRTFRWY 210
           P  G PS +FRWY
Sbjct: 255 PAQGFPSPSFRWY 267


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 214 GTFVDTTAFVDQVTSCCG 161
           G  +DT+ FVD +  C G
Sbjct: 641 GNKIDTSLFVDHIRQCVG 658


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 213  PSKSSRRKPRKWVRVPSNTLGYW 281
            PS SS +KP K    P +T  +W
Sbjct: 1161 PSTSSWQKPTKPSYRPPSTTNHW 1183



 Score = 20.6 bits (41), Expect = 8.0
 Identities = 16/65 (24%), Positives = 22/65 (33%)
 Frame = +3

Query: 87   TTNQKWAKKRFXXXXXXXXXXXPASPQQLVT*STNAVVSTNVPSKSSRRKPRKWVRVPSN 266
            TT ++    R               P Q  T    AVV   V   S   +P ++V  P N
Sbjct: 1055 TTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQPCEPGQYVPDPHN 1114

Query: 267  TLGYW 281
               Y+
Sbjct: 1115 CNAYY 1119


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 278 LDKLKAERERGITIDIALWKFETGKYYVTII 370
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 278 LDKLKAERERGITIDIALWKFETGKYYVTII 370
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 213 PSKSSRRKPR 242
           P+K SRRKPR
Sbjct: 257 PTKVSRRKPR 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,218
Number of Sequences: 336
Number of extensions: 2383
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)