Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J12
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 242 9e-65
03_01_0547 + 4093196-4093657,4094267-4095148 242 9e-65
03_01_0544 + 4082528-4082989,4083585-4084466 242 9e-65
03_01_0543 + 4076981-4077442,4078145-4079026 242 9e-65
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 151 4e-37
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 151 4e-37
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 106 1e-23
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 101 2e-22
02_04_0462 + 23131433-23132836 79 1e-15
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 78 4e-15
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 66 1e-11
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 55 3e-08
02_04_0148 - 20198407-20201424 52 3e-07
03_05_0511 + 25056018-25059107 51 4e-07
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 50 1e-06
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 49 2e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 48 4e-06
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 44 9e-05
04_01_0103 + 1082077-1082167,1083037-1085477 41 5e-04
02_04_0017 + 18937774-18937864,18938505-18940945 41 5e-04
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 39 0.002
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 38 0.003
01_06_0662 + 30987187-30987277,30987825-30990214 37 0.010
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 36 0.018
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.028
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 31 0.50
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 26 0.65
06_02_0242 - 13426801-13426857,13427951-13428353,13429116-134291... 31 0.66
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 0.88
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 30 1.2
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 1.5
02_02_0694 + 13013966-13014361 29 2.7
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 3.5
07_01_0220 - 1631395-1631496,1632063-1634036 26 4.1
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 27 6.2
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 27 6.2
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 8.2
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 8.2
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 242 bits (593), Expect = 9e-65
Identities = 114/130 (87%), Positives = 119/130 (91%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 461 GEFEAGISKN 490
G FEAGISK+
Sbjct: 121 GGFEAGISKD 130
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 242 bits (593), Expect = 9e-65
Identities = 114/130 (87%), Positives = 119/130 (91%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 461 GEFEAGISKN 490
G FEAGISK+
Sbjct: 121 GGFEAGISKD 130
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 242 bits (593), Expect = 9e-65
Identities = 114/130 (87%), Positives = 119/130 (91%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 461 GEFEAGISKN 490
G FEAGISK+
Sbjct: 121 GGFEAGISKD 130
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 242 bits (593), Expect = 9e-65
Identities = 114/130 (87%), Positives = 119/130 (91%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 461 GEFEAGISKN 490
G FEAGISK+
Sbjct: 121 GGFEAGISKD 130
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 151 bits (365), Expect = 4e-37
Identities = 65/120 (54%), Positives = 91/120 (75%)
Frame = +2
Query: 122 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 301
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 302 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 481
ERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGM 367
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 151 bits (365), Expect = 4e-37
Identities = 65/120 (54%), Positives = 91/120 (75%)
Frame = +2
Query: 122 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 301
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 302 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 481
ERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGM 367
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 106 bits (254), Expect = 1e-23
Identities = 50/117 (42%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Frame = +2
Query: 149 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 328
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 329 LWKFETGKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 487
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEK 120
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 101 bits (243), Expect = 2e-22
Identities = 41/82 (50%), Positives = 61/82 (74%)
Frame = +2
Query: 245 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 424
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 425 ADCAVLIVAAGTGEFEAGISKN 490
+D A+L++ A G FEAG+ N
Sbjct: 336 SDAAILVIDASIGSFEAGMGIN 357
>02_04_0462 + 23131433-23132836
Length = 467
Score = 79.4 bits (187), Expect = 1e-15
Identities = 44/122 (36%), Positives = 64/122 (52%)
Frame = +2
Query: 98 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 277
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 278 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 458 TG 463
G
Sbjct: 168 DG 169
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 77.8 bits (183), Expect = 4e-15
Identities = 45/119 (37%), Positives = 62/119 (52%)
Frame = +2
Query: 107 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 286
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEAGKAKAVAFDEIDK 107
Query: 287 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
E+ RGITI A ++ET K + +D PGH D++KNMITG +Q D +L+V+A G
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDG 166
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 66.1 bits (154), Expect = 1e-11
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +2
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 484
+G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 74
Query: 485 K 487
+
Sbjct: 75 R 75
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 55.2 bits (127), Expect = 3e-08
Identities = 39/113 (34%), Positives = 55/113 (48%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
NI + H+DSGK+T T ++Y G I E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
+GITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGG 172
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 51.6 bits (118), Expect = 3e-07
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 305 RGITI---DIALWKF--ETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
R IT+ IAL + + G + V +ID+PGH DF + AD A+++V A G
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/113 (29%), Positives = 52/113 (46%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N ++ HVD GK+T HL+ CG + G ++ +D L E+
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
R IT+ A G + V +ID+PGH DF + + +D A+++V A G
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/113 (30%), Positives = 49/113 (43%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N+ VI HVD GK+T L+ +CG + +D + ERE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
RGITI + + + ++D PGH DF + + AVL+V AG G
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 48.8 bits (111), Expect = 2e-06
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 305 RGITIDIAL----WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
RGITI + + Y + +ID PGH DF + + + A+L+V A G
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 48.0 bits (109), Expect = 4e-06
Identities = 35/110 (31%), Positives = 56/110 (50%)
Frame = +2
Query: 119 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 298
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 299 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ERGITI K+ + IID PGH DF + D A++ +
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 43.6 bits (98), Expect = 9e-05
Identities = 41/128 (32%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 305 RGITIDI---------------ALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAV 439
RGIT+ A + + Y + +ID PGH DF + + A+
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGAL 162
Query: 440 LIVAAGTG 463
L+V A G
Sbjct: 163 LVVDAAQG 170
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 41.1 bits (92), Expect = 5e-04
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 268
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 269 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ + E ++ + + + +Y + +ID+PGH DF + D A+++V
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 41.1 bits (92), Expect = 5e-04
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 268
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 269 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ + E ++ + + + +Y + +ID+PGH DF + D A+++V
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 39.1 bits (87), Expect = 0.002
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 292
N+ VI HVD GKST T L+ G I + + + A E +G + K + L
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGI--SLY 78
Query: 293 AERERGITIDIALWKFETGK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
E D AL FE + Y + +ID+PGH DF + D A+++V
Sbjct: 79 YEMT-----DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/113 (24%), Positives = 49/113 (43%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N+ ++GH+ GK+ L+ + +D F+ E + + F V ++ +
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDT-----FDSEGERHVR--FTDTRVDEQERRVSI 202
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
+ + + + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 203 KAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 36.7 bits (81), Expect = 0.010
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 292
N+ V+ HVD GKST T L+ G I + + + + E +G + K + +
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKSTGISLYYE 80
Query: 293 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
E ++ + +Y + +ID+PGH DF + D A+++V
Sbjct: 81 MSDE---SLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 35.9 bits (79), Expect = 0.018
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
NI ++ HVD GK+T ++ + + + + QE ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDF 394
RGITI + IID PGH DF
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSDF 195
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.7 bits (71), Expect(2) = 0.028
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 248 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 424
GK S + + A+ GIT I + E +T +D PGH F G +
Sbjct: 209 GKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAV 268
Query: 425 ADCAVLIVAAGTG 463
D VL+VAA G
Sbjct: 269 TDIVVLVVAADDG 281
Score = 21.4 bits (43), Expect(2) = 0.028
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +2
Query: 128 IVVIGHVDSGKST 166
+ ++GHVD GK++
Sbjct: 200 VTIMGHVDHGKTS 212
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 356 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 25.8 bits (54), Expect(2) = 0.65
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +2
Query: 284 KLKAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 451
K+ A GIT I ++ + + +D PGH F G D +++V+
Sbjct: 451 KVVASEAGGITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVS 510
Query: 452 AGTG 463
A G
Sbjct: 511 ADDG 514
Score = 23.4 bits (48), Expect(2) = 0.65
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 IVVIGHVDSGKSTTTGHL 181
+ ++GHVD GK+T ++
Sbjct: 430 VTIMGHVDHGKTTLLDYI 447
>06_02_0242 -
13426801-13426857,13427951-13428353,13429116-13429162,
13429513-13429555,13431386-13431414
Length = 192
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 442 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFEL 335
+HG S+ R D + ++ S SR D I F GF++
Sbjct: 151 RHGEESMERGRDRIGEDSSSSRPAMDDQISFVGFDI 186
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 0.88
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 305 AHARPLVCPIPKRI*RNPYPFPGLPSR 225
A ARP + P+P+R + +PFP P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>02_02_0694 + 13013966-13014361
Length = 131
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 361 HHHRRSWTQRFHQEHDHWN 417
HHH R H+ HD WN
Sbjct: 78 HHHHRHHGHHHHRGHDRWN 96
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>07_01_0220 - 1631395-1631496,1632063-1634036
Length = 691
Score = 25.8 bits (54), Expect(2) = 4.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 376 SVDDGDIVFAGFELPESNIDGDTTLTLG 293
S D VF+GF +DG T+T G
Sbjct: 24 SASDDQFVFSGFSGANVTLDGTATVTAG 51
Score = 20.6 bits (41), Expect(2) = 4.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 262 EGTLTHFLGFLLELFDGT 209
+GT T G LLEL +GT
Sbjct: 43 DGTATVTAGGLLELTNGT 60
>03_06_0030 +
31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 475 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNIDGDTTLTL 296
GF + + + + G L+ S+DH +D+ + S D+G I F G P+ + LTL
Sbjct: 204 GFPPSDVALNARQGTFDLQLSADHYVDDDNAS---DNGPIDFLGV-APDKKPQNNADLTL 259
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 290 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+A ++ G+ + + +G + +ID PGH F G+ D A+L+V
Sbjct: 395 QARKDMGLRSPVCCFLGHSG---LLLIDTPGHETFRNFRCIGSRLCDIAILVV 444
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 113 KVHINIVVIGHVDSG 157
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +2
Query: 146 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 325
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 326 AL 331
+
Sbjct: 488 TI 489
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,073,350
Number of Sequences: 37544
Number of extensions: 270084
Number of successful extensions: 895
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -