Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J12
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 272 9e-74
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 272 9e-74
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 272 9e-74
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 247 3e-66
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 160 6e-40
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 160 6e-40
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 145 1e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 5e-34
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 75 2e-14
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 75 2e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 75 2e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 75 2e-14
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 75 2e-14
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 6e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 8e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 5e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.005
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.085
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.085
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.45
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.60
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 1.0
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.0
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.4
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.4
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 1.4
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 4.2
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 4.2
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 4.2
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 7.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 7.4
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 9.8
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 9.8
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 9.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 272 bits (667), Expect = 9e-74
Identities = 126/130 (96%), Positives = 128/130 (98%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 461 GEFEAGISKN 490
GEFEAGISKN
Sbjct: 121 GEFEAGISKN 130
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 272 bits (667), Expect = 9e-74
Identities = 126/130 (96%), Positives = 128/130 (98%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 461 GEFEAGISKN 490
GEFEAGISKN
Sbjct: 121 GEFEAGISKN 130
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 272 bits (667), Expect = 9e-74
Identities = 126/130 (96%), Positives = 128/130 (98%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 461 GEFEAGISKN 490
GEFEAGISKN
Sbjct: 121 GEFEAGISKN 130
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 247 bits (605), Expect = 3e-66
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 281 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 451
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 160 bits (388), Expect = 6e-40
Identities = 72/123 (58%), Positives = 92/123 (74%)
Frame = +2
Query: 110 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 289
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 290 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 469
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 470 EAG 478
E G
Sbjct: 287 ETG 289
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 160 bits (388), Expect = 6e-40
Identities = 72/123 (58%), Positives = 92/123 (74%)
Frame = +2
Query: 110 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 289
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 290 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 469
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 470 EAG 478
E G
Sbjct: 305 ETG 307
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 145 bits (352), Expect = 1e-35
Identities = 64/128 (50%), Positives = 91/128 (71%)
Frame = +2
Query: 104 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 283
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 284 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 464 EFEAGISK 487
EFE G +
Sbjct: 224 EFETGFDR 231
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 5e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +2
Query: 101 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 280
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 281 DKLKAER 301
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 75.4 bits (177), Expect = 2e-14
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 286
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 287 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 466
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 467 FE 472
E
Sbjct: 146 ME 147
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/119 (36%), Positives = 62/119 (52%)
Frame = +2
Query: 107 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 286
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 287 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 148
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/119 (36%), Positives = 62/119 (52%)
Frame = +2
Query: 107 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 286
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 287 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/119 (36%), Positives = 62/119 (52%)
Frame = +2
Query: 107 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 286
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 287 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 75.4 bits (177), Expect = 2e-14
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 286
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 287 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 466
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 467 FE 472
E
Sbjct: 146 ME 147
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.0 bits (129), Expect = 1e-08
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 2e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.0 bits (124), Expect = 6e-08
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 43.6 bits (98), Expect = 8e-05
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 277
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 278 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 446 VAAGTG 463
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 277
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 278 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 446 VAAGTG 463
V +G
Sbjct: 141 VDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.1 bits (82), Expect(2) = 5e-04
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 248 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 424
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 425 ADCAVLIVAAGTG 463
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 5e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 128 IVVIGHVDSGKST 166
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 107 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 283
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 284 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 107 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 283
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 284 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.085
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.5 bits (73), Expect = 0.085
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 125 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 305 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.45
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Frame = +2
Query: 95 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 265
P K+ + + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 266 YAWVL------DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS-- 421
+L + + +D + K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIFGMTGH 250
Query: 422 QADCAVLIVAAGTG 463
D +L++ A G
Sbjct: 251 MPDYTMLMIGANMG 264
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 356 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 451
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 379 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 290
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 203 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 203 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 304
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 95 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 187
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.1 bits (62), Expect = 1.8
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Frame = +2
Query: 116 VHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 289
+ + + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 167 IEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDV 223
Query: 290 KAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVA 451
RG ++ A E VT+ID G + K I G + A L+VA
Sbjct: 224 IGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVA 283
Query: 452 AGTG 463
A G
Sbjct: 284 ADRG 287
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 122 INIVVIGHVDSGKSTTT 172
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 122 INIVVIGHVDSGKSTTT 172
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 332 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 454
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 272 WVLDKLKAERERGITIDIALWKFETGKYYVTII 370
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 448 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 317
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 448 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 317
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 272 WVLDKLKAERERGITIDIALWKFETGKYYVTII 370
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 272 WVLDKLKAERERGITIDIALWKFETGKYYVTII 370
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 448 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 317
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 448 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 317
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 253
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 253
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 253
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 84 LLDSLFHFTKLFLQTLTTD 28
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 84 LLDSLFHFTKLFLQTLTTD 28
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 475 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 344
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,975,046
Number of Sequences: 27780
Number of extensions: 221674
Number of successful extensions: 792
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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