Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J11
         (310 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GSV9 Cluster: Ornithine decarboxylase antizyme; n=1; ...    81   6e-15
UniRef50_Q1YMA5 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q2GN54 Cluster: Putative uncharacterized protein; n=3; ...    32   2.9  
UniRef50_A1UWW2 Cluster: RemN protein; n=6; Burkholderia|Rep: Re...    31   3.8  
UniRef50_A7DCW8 Cluster: Dihydropteroate synthase; n=5; Alphapro...    31   5.0  
UniRef50_Q5VRC0 Cluster: Putative uncharacterized protein P0707D...    31   6.6  
UniRef50_P90770 Cluster: Putative uncharacterized protein; n=2; ...    31   6.6  
UniRef50_Q8IH82 Cluster: AT31511p; n=10; Coelomata|Rep: AT31511p...    30   8.8  

>UniRef50_Q9GSV9 Cluster: Ornithine decarboxylase antizyme; n=1;
           Bombyx mori|Rep: Ornithine decarboxylase antizyme -
           Bombyx mori (Silk moth)
          Length = 261

 Score = 80.6 bits (190), Expect = 6e-15
 Identities = 42/70 (60%), Positives = 46/70 (65%)
 Frame = +3

Query: 99  MTMLIQPLXXXXXXXXXXXXKGVETNPVEAPKKY*PGDSASLSAAGSKRSALSASDAECF 278
           MTMLIQ L             GV++   +  +K   GD ASLSA GSKRSALSASDAECF
Sbjct: 1   MTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECF 60

Query: 279 SLCLGAGPLW 308
           SLCLGAGPLW
Sbjct: 61  SLCLGAGPLW 70


>UniRef50_Q1YMA5 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 157

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 309 TTEARRPGTAKNTR-RRKPTKPTACCRPRSATRCRRASISSGLQQDW 172
           T  A  PGT +  R RR P KP   CRPR+     R S  + +++ W
Sbjct: 78  TAYASSPGTPRYLRIRRMPKKPYGVCRPRAELATLR-SCPAHVEKGW 123


>UniRef50_Q2GN54 Cluster: Putative uncharacterized protein; n=3;
           Sordariales|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 282

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 303 EARRPGTAKNTRRRKPTKPTACCRPRSATRCRRASIS 193
           + R P   + T     TKPT   RPRS  R R+A+I+
Sbjct: 131 QTRTPPAPEPTPAAATTKPTGTTRPRSRLRARKAAIN 167


>UniRef50_A1UWW2 Cluster: RemN protein; n=6; Burkholderia|Rep: RemN
           protein - Burkholderia mallei (strain SAVP1)
          Length = 558

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -2

Query: 306 TEARRPGTAKNTRRRKPTKPTACCRPRSATRCRRASISSG 187
           T +RR   A++ RRR PT+  A  R R A R R A  + G
Sbjct: 66  TRSRRAPAARSRRRRSPTRARAPRRARPAARRRSARNAPG 105


>UniRef50_A7DCW8 Cluster: Dihydropteroate synthase; n=5;
           Alphaproteobacteria|Rep: Dihydropteroate synthase -
           Methylobacterium extorquens PA1
          Length = 410

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 294 RPGTAKNTRRRKPTKPTACCRPRSATRCRRASISS 190
           R   A +TR R+    TA  RPR + RC RAS S+
Sbjct: 22  RNALAPSTRWRRSCPMTATFRPRPSCRCARASASA 56


>UniRef50_Q5VRC0 Cluster: Putative uncharacterized protein
           P0707D10.19; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0707D10.19 - Oryza sativa subsp. japonica (Rice)
          Length = 123

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2

Query: 297 RRPGTAKNTRRRKPTKPTACCRPRSATRCRRAS 199
           R  G+A  +RR +P  P    RPRS+  CRRAS
Sbjct: 84  RSVGSASASRRSRP--PPRSARPRSSPCCRRAS 114


>UniRef50_P90770 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 905

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -2

Query: 291 PGTAKNTRRRKPTKPTACCRPRSATRCRRASISSGLQ 181
           PG    T ++ PTK  +   PR+ +R +R+ +S+GLQ
Sbjct: 762 PGNVTTTLQKSPTKREST-PPRNTSRAKRSLLSTGLQ 797


>UniRef50_Q8IH82 Cluster: AT31511p; n=10; Coelomata|Rep: AT31511p -
           Drosophila melanogaster (Fruit fly)
          Length = 655

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 264 RKPTKPTACCRPRSATRCRRASISS 190
           RKPT P   C+PRS  RC R S S+
Sbjct: 86  RKPTTPA--CKPRSVNRCPRKSSSN 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,828,577
Number of Sequences: 1657284
Number of extensions: 3011733
Number of successful extensions: 9218
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9202
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)