Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J11
         (310 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001371-1|AAN71126.1|  655|Drosophila melanogaster AT31511p pro...    30   0.51 
AE014297-1593|AAF54877.2|  583|Drosophila melanogaster CG7340-PC...    30   0.51 
AE014297-1592|AAF54874.2|  655|Drosophila melanogaster CG7340-PA...    30   0.51 
Y07662-1|CAA68943.1|  949|Drosophila melanogaster GATA factor pr...    26   8.2  
X76217-1|CAA53807.1|  779|Drosophila melanogaster a box binding ...    26   8.2  
BT021436-1|AAX33584.1|  984|Drosophila melanogaster GH14495p pro...    26   8.2  
AY094725-1|AAM11078.1|  744|Drosophila melanogaster GH22837p pro...    26   8.2  
AE014297-4452|AAS65226.1|  744|Drosophila melanogaster CG7802-PB...    26   8.2  
AE014297-4451|AAF56948.1|  744|Drosophila melanogaster CG7802-PA...    26   8.2  

>BT001371-1|AAN71126.1|  655|Drosophila melanogaster AT31511p
           protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 0.51
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 264 RKPTKPTACCRPRSATRCRRASISS 190
           RKPT P   C+PRS  RC R S S+
Sbjct: 86  RKPTTPA--CKPRSVNRCPRKSSSN 108


>AE014297-1593|AAF54877.2|  583|Drosophila melanogaster CG7340-PC,
           isoform C protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 0.51
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 264 RKPTKPTACCRPRSATRCRRASISS 190
           RKPT P   C+PRS  RC R S S+
Sbjct: 14  RKPTTPA--CKPRSVNRCPRKSSSN 36


>AE014297-1592|AAF54874.2|  655|Drosophila melanogaster CG7340-PA,
           isoform A protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 0.51
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 264 RKPTKPTACCRPRSATRCRRASISS 190
           RKPT P   C+PRS  RC R S S+
Sbjct: 86  RKPTTPA--CKPRSVNRCPRKSSSN 108


>Y07662-1|CAA68943.1|  949|Drosophila melanogaster GATA factor
           protein.
          Length = 949

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 237 CRPRSATRCRRASISS 190
           CRP   T+CRR++ SS
Sbjct: 664 CRPTQTTKCRRSTCSS 679


>X76217-1|CAA53807.1|  779|Drosophila melanogaster a box binding
           factor (ABF), alsocalled dGATA-b protein.
          Length = 779

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 237 CRPRSATRCRRASISS 190
           CRP   T+CRR++ SS
Sbjct: 494 CRPTQTTKCRRSTCSS 509


>BT021436-1|AAX33584.1|  984|Drosophila melanogaster GH14495p
           protein.
          Length = 984

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 310 HHRGPAPRHSEKHSASEAD 254
           HHR  APR+ + H  +E D
Sbjct: 925 HHRARAPRYQDYHYTTETD 943


>AY094725-1|AAM11078.1|  744|Drosophila melanogaster GH22837p
           protein.
          Length = 744

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 240 KRSALSASDAECFSLCLG 293
           KR+   AS  ECF LCLG
Sbjct: 222 KRTVSVASRRECFELCLG 239


>AE014297-4452|AAS65226.1|  744|Drosophila melanogaster CG7802-PB,
           isoform B protein.
          Length = 744

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 240 KRSALSASDAECFSLCLG 293
           KR+   AS  ECF LCLG
Sbjct: 222 KRTVSVASRRECFELCLG 239


>AE014297-4451|AAF56948.1|  744|Drosophila melanogaster CG7802-PA,
           isoform A protein.
          Length = 744

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 240 KRSALSASDAECFSLCLG 293
           KR+   AS  ECF LCLG
Sbjct: 222 KRTVSVASRRECFELCLG 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,520,510
Number of Sequences: 53049
Number of extensions: 144819
Number of successful extensions: 551
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)