Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J09
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.6  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 471 KNFSDSLNSNRRADID 424
           KNF+DS  SNR  +ID
Sbjct: 415 KNFNDSPESNRSNEID 430


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 492 TIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKP 388
           T +  T  + SDS  S+   D ++   S+ +YIKP
Sbjct: 125 TASRETKSSESDSGASSADPDDELRSSSAFSYIKP 159


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 471 KNFSDSLNSNRRADIDVTQYSSTAY 397
           K  SDS N+N + + +  QY + A+
Sbjct: 456 KEESDSNNNNNKEEGNSCQYCNIAF 480


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/29 (24%), Positives = 13/29 (44%)
 Frame = -1

Query: 252 HCNGTHLALCSSCRIRHEAEI*WFP*LHQ 166
           +C    + L   CR +  + + W P  H+
Sbjct: 65  YCLFLEMTLAHHCRFKFSSSVGWSPAGHE 93


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 365 NWLPMTLIGFMYAVL 409
           NW P  +IG M + L
Sbjct: 91  NWYPRLIIGIMNSTL 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,584
Number of Sequences: 336
Number of extensions: 2685
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)