Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J08
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.37
SB_29493| Best HMM Match : PH (HMM E-Value=0.48) 31 0.49
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_32378| Best HMM Match : DUF591 (HMM E-Value=1.6) 30 1.1
SB_32849| Best HMM Match : Toxin_10 (HMM E-Value=4.2) 30 1.1
SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035) 29 1.5
SB_28689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_52756| Best HMM Match : Albicidin_res (HMM E-Value=7.1) 29 2.6
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_6094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3) 28 3.5
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_54813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_40260| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_30390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5) 28 4.6
SB_36984| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_32049| Best HMM Match : RVT_1 (HMM E-Value=6.7e-15) 27 6.1
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 27 6.1
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 27 6.1
SB_5455| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 27 6.1
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 27 6.1
SB_12242| Best HMM Match : RGS (HMM E-Value=0.75) 27 8.0
SB_33702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 280 DEKSESAVNRCTITSYDTVNSAIVCNNVGSSVKMDGKKC-EEFSDVGCARQLSLP-ANLR 453
DE S++++NRC T +++ S G + +DG C +E + GC L ANL
Sbjct: 604 DECSDNSLNRCQQTCNNSIGSFKCTCRPGYHLAIDGFSCTKEKAPPGCGIALEADLANLA 663
Query: 454 AT 459
AT
Sbjct: 664 AT 665
>SB_29493| Best HMM Match : PH (HMM E-Value=0.48)
Length = 1064
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 4 RGADTALRRSWSDPSSRVPERREANNSETYSAPNLYS---LFPPTRRASSPEPRS 159
RGAD L ++ P+ P+R E+ S PN + L R P PRS
Sbjct: 344 RGADVLLENTYVTPAGPPPQRSESQTEGVSSRPNFFKRTWLRISKRGPKRPRPRS 398
>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1432
Score = 30.7 bits (66), Expect = 0.65
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 109 YSLFPPTRRASSP-EPRSPLALEISSEIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDE 285
Y PP+RR + P EP S L + +S + E K+ TSPPA ++ RR D
Sbjct: 635 YKTPPPSRRRARPGEPPSTL-IRMSPRVSPRTGRLTQYENKVRFTSPPACSTPRRHTDDH 693
Query: 286 KSESAVNRCTI-TSYDTVNSAIVCNNVGSSV 375
+ + + T D V+ A V +V
Sbjct: 694 VNLDTESELDMKTHLDNVDMAKTMGPVHQTV 724
>SB_32378| Best HMM Match : DUF591 (HMM E-Value=1.6)
Length = 457
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 200 IDVTISDDISNARGERGSGELALRVGGNKEYKLGAE*VSLLFASLRSGTRDDGSLQ 33
+DV I D + A +RG+GE V K +KL V+++ A ++ T LQ
Sbjct: 4 VDVDIDDTLPAASADRGAGEDETDVAKLKGFKLAMGSVAVIDAVIQENTERVQELQ 59
>SB_32849| Best HMM Match : Toxin_10 (HMM E-Value=4.2)
Length = 322
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 235 STSPPATNSDRRSFFDEKSESAVNR--CTITSYDTVNSAIVCNNVGSSVKMDGKKCEEFS 408
+T +T +D+R+ + +++ CT S T+N C V S +D + C S
Sbjct: 85 TTVSDSTLNDKRACTTVSDSTLIDKRACTTVSDSTLNDKRACTTVSDSTLIDKRACMAVS 144
Query: 409 D 411
D
Sbjct: 145 D 145
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 238 TSPPATNSDRRSFFDEKSESAVN---RCTITSYDTVNSAIVCNNVGSSVKMDGKKCEEFS 408
T +T +D+R+ S+S +N CT S T+N C V S +D + C S
Sbjct: 58 TVSDSTLNDKRAC-TTVSDSTLNDERACTTVSDSTLNDKRACTTVSDSTLIDKRACTTVS 116
Query: 409 D 411
D
Sbjct: 117 D 117
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 235 STSPPATNSDRRSFF--DEKSESAVNRCTITSYDTVNSAIVCNNVGSSVKMDGKKCEEFS 408
+T +T D+R+ + + + CT S T+N C V S +D + C S
Sbjct: 225 TTVSDSTLIDKRACMAVSDSTRNDKRACTTVSDSTLNDKRACTTVSDSTLIDKRACTTVS 284
Query: 409 D 411
D
Sbjct: 285 D 285
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 289 SESAVN---RCTITSYDTVNSAIVCNNVGSSVKMDGKKCEEFSD 411
S+S +N CT S T+N C V S D + C+ SD
Sbjct: 18 SDSTLNDKRACTTVSDSTLNDKRACTTVSDSTLNDKRACKTVSD 61
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +1
Query: 250 ATNSDRRSFFDEKSESAVN---RCTITSYDTVNSAIVCNNVGSSVKMDGKKCEEFSD 411
+T +D+R+ S+S +N CT S T+N C V S D + C SD
Sbjct: 20 STLNDKRAC-TTVSDSTLNDKRACTTVSDSTLNDKRACKTVSDSTLNDKRACTTVSD 75
>SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035)
Length = 885
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +1
Query: 13 DTALRRSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIV 192
DT R +S R P+ + T P L SL P RR + PR P+AL+ + +
Sbjct: 45 DTPAR--YSVQEGRTPDLKREEICTTPVLPGLPSL-PSDRRHGNLRPRQPVALDFT---L 98
Query: 193 TSINGHRDLEIKLFSTSPPAT 255
H +K S +P T
Sbjct: 99 KGHQAHSKQNLKSLSNTPGGT 119
>SB_28689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/76 (31%), Positives = 32/76 (42%)
Frame = +1
Query: 46 SSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGHRDLEI 225
+SR R N E S P SL SSPE +SP L+ E ++ ++
Sbjct: 118 NSRAKFSRNLNTEEDKSTPECASLHTEQAVQSSPERKSPGLLKRDKEKPMLLSREKEENG 177
Query: 226 KLFSTSPPATNSDRRS 273
KL S +NS RS
Sbjct: 178 KLLSVE--NSNSRARS 191
>SB_52756| Best HMM Match : Albicidin_res (HMM E-Value=7.1)
Length = 246
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 4 RGADTALRRSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISS 183
R +L W S+ E+ E N + Y P + TRR SP P +P + ++
Sbjct: 91 RDGKGSLLSEWKGRVSK-SEKNETNKTAEY-VPRVSKEQKVTRRKFSPNPSTPEHVPSTT 148
Query: 184 EIVTSINGH 210
E V+S H
Sbjct: 149 EQVSSTTEH 157
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 161 LLRWKYRQRSLRRSMGIATWKLNYFQPRLRQRTPTDAP 274
LL K R + L +S+G+++ N++ P R +TP+ P
Sbjct: 873 LLSDKDRCKELMKSLGLSSDPGNWYSPARRSKTPSPRP 910
>SB_6094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 13 DTALRRSWSDPSSRVPERREANNSETYSAPNLYSLFP-PTRRASSPEPRSPLALEISSEI 189
D+ + S D + RV R + +AP + P P R S+P P++P AL + +I
Sbjct: 41 DSTVSDSSEDYTPRVSRPRPQPRARARAAPADTTPKPSPARNRSTPTPKTPAAL-LKQQI 99
Query: 190 VTSINGHRDLEIKLFSTSPPATNSDRRS 273
+ S + E + S + NS RR+
Sbjct: 100 LES-----EDESEYMSDEEASRNSSRRA 122
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 43 PSSRVPE-RREANNSETYSAPNLYSLFPPTRRASSPEPRSP 162
PS+R+P+ R +++ ++ + L + PP + P+P+ P
Sbjct: 3155 PSTRIPDVRYRSSSQDSRDSDELPDILPPPKPPIKPKPKVP 3195
>SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3)
Length = 258
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = +1
Query: 52 RVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGHRDLEIKL 231
R P RR + S P ++ S P P++ SSE+V GH D E +
Sbjct: 35 RDPTRRSSLQPRRISVQGSNGSANPEQQTSQPRVLEPISN--SSEVVVKETGHNDPEKEH 92
Query: 232 FSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNS 342
+T N ++K + RC++ VN+
Sbjct: 93 SNTVHAQKN------HEQKQDLKTRRCSVPLPPAVNA 123
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 58 PERREANNSETYSAPNLYSLFPPTRRASSPEPRSP 162
PE N ETY+ P + ++PP PE RSP
Sbjct: 734 PEGNNQNEGETYNKPTIGIIYPP------PEVRSP 762
>SB_54813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 101 LICIPYSRQPEEPVHQSLVLLLRWKYRQRSLRRSMGIA 214
++ +P+ +P+ + LRWK +R LRR +G+A
Sbjct: 34 ILALPFLARPKWRPFGFVAFPLRWKPTERLLRRLLGLA 71
>SB_40260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 55 VPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEI 189
VP RE N + TY PN Y R+A P++P + +IS I
Sbjct: 25 VPMIREQNGNHTYGLPNRYGSTRLLRKAVK-NPKAP-STDISERI 67
>SB_30390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 76 NNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEI 189
N + TY PN Y P+R+A P++P + EIS I
Sbjct: 3 NGNHTYGLPNRYGSTRPSRKAVK-NPKAP-STEISERI 38
>SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)
Length = 1308
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 124 PTRRASSPEPRSPLALEIS-SEIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESA 300
P RRA PEP L S + ++ +N ++E L+S S S++R+ F + S
Sbjct: 555 PPRRAY-PEPPQSLTSPYSFNRPLSIVNEQEEMENTLYSNSEGGETSNKRNGFQARKTSK 613
Query: 301 VNR 309
R
Sbjct: 614 EGR 616
>SB_36984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 29 EAGVTRHLVYQSEERQITVKLIL-HLICIPYSRQPEEPVHQ 148
E G+ R V I V+ I+ + + +PYSR+P+ H+
Sbjct: 363 EEGIERGAVKTDHTFIIAVRFIIKNTVILPYSRRPQSQTHK 403
>SB_32049| Best HMM Match : RVT_1 (HMM E-Value=6.7e-15)
Length = 716
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 451 VGLPVAKADERIPHRKILHTFS 386
V L ++KA + +PHRK+LH S
Sbjct: 448 VYLDLSKAFDSVPHRKLLHKLS 469
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 1 ARGADTALRRSWSDPSSRVPERREANNSETYSAPN 105
A+G A R SW PS V +RR N + T+ N
Sbjct: 613 AKGGCAARRLSWGFPSHDVVKRRPVNCNTTHYRAN 647
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 29 EAGVTRHLVYQSEERQITVKLIL-HLICIPYSRQPEEPVHQ 148
E G+ R V I V+ I+ + + +PYSR+P+ H+
Sbjct: 55 EEGIERGAVKTDHTFIIAVRFIIKNTVILPYSRRPQSQTHK 95
>SB_5455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 27.5 bits (58), Expect = 6.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 TNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVKMDGKKCEE-FSDVGC 420
T S RS F+ SE R T D + A + NN + V ++ CE FSD C
Sbjct: 304 TESGFRSVFESCSELQSIRLLFTKIDDDSLACLANNCRNLVDINLAGCERIFSDGLC 360
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 1 ARGADTALRRSWSDPSSRVPERREANNSETYSAPN 105
A+G A R SW PS V +RR N + T+ N
Sbjct: 56 AKGGCAARRLSWGFPSHDVVKRRPVNCNTTHYRAN 90
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 1 ARGADTALRRSWSDPSSRVPERREANNSETYSAPN 105
A+G A R SW PS V +RR N + T+ N
Sbjct: 56 AKGGCAARRLSWGFPSHDVVKRRPVNCNTTHYRAN 90
>SB_12242| Best HMM Match : RGS (HMM E-Value=0.75)
Length = 737
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 1 ARGADTALRRSWSDPSSRVPERREA 75
A+G A R SW+ P + PERR++
Sbjct: 168 AKGGCAARRLSWTVPRKKQPERRKS 192
>SB_33702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 43 PSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSE 186
P+S +P ++ SE P+ PP+ R+ SP P L+L S+
Sbjct: 190 PASPLPPKKSEQGSELGRPPS--KPLPPSPRSKSPMPGQSLSLPQRSD 235
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.1 bits (57), Expect = 8.0
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 130 RRASSPEPRSPLALEISSEIVTSINGHRDLEIKLFSTSPPATNS--DRRSFFDEKSESAV 303
+ SSP P A + + N R L+ + T +S + +ESAV
Sbjct: 92 KATSSPSTTEPFAHQCTCCSKKFNNSSRFLKHMTWHTKTRRLDSPPEEERASPSTTESAV 151
Query: 304 NRCTITSYDTVNSAIVCNNVGSSVKMDGKKCE 399
+CT S NS+ + ++G ++M K E
Sbjct: 152 YQCTQCSKSFSNSSSLATHIGWHLRMTSHKQE 183
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,724
Number of Sequences: 59808
Number of extensions: 301174
Number of successful extensions: 1851
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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