Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J08
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027951-1|AAH27951.1|  672|Homo sapiens C20orf32 protein protein.     31   1.6  
AL121914-13|CAC12719.2|  786|Homo sapiens chromosome 20 open rea...    31   1.6  
Z71621-1|CAA96283.1|  372|Homo sapiens Wnt-13 protein.                 30   4.8  
AL354760-3|CAI22309.1|  372|Homo sapiens wingless-type MMTV inte...    30   4.8  
AL109932-7|CAI22706.1|  372|Homo sapiens wingless-type MMTV inte...    30   4.8  
AB045116-1|BAB11984.1|  372|Homo sapiens WNT-2B Isoform 1 protein.     30   4.8  
X63131-1|CAA44841.1|  633|Homo sapiens My1 (PML) protein.              29   6.4  
M79462-1|AAA60388.1|  860|Homo sapiens PML protein.                    29   6.4  
BC139795-1|AAI39796.1|  540|Homo sapiens PML protein protein.          29   6.4  
AF230411-1|AAG50190.1|  585|Homo sapiens tripartite motif protei...    29   6.4  
AF230406-1|AAG50185.1|  633|Homo sapiens tripartite motif protei...    29   6.4  
AF230401-1|AAG50180.1|  882|Homo sapiens tripartite motif protei...    29   6.4  
AB209411-1|BAD92648.1|  862|Homo sapiens promyelocytic leukemia ...    29   6.4  
BC001962-1|AAH01962.1|  496|Homo sapiens exonuclease 3'-5' domai...    29   8.5  
AK001600-1|BAA91781.1|  496|Homo sapiens protein ( Homo sapiens ...    29   8.5  
AF392450-1|AAL40663.1|  950|Homo sapiens oxysterol-binding prote...    29   8.5  
AF323726-1|AAG53407.2|  927|Homo sapiens OSBP-related protein 1 ...    29   8.5  

>BC027951-1|AAH27951.1|  672|Homo sapiens C20orf32 protein protein.
          Length = 672

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
 Frame = +1

Query: 31  SWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGH 210
           S+  PSS +  R E  N++    PN+Y +     +A+S   ++   LE + E+  +  GH
Sbjct: 328 SYKVPSSFLIPRVEQQNTK----PNIYDI----PKATSSVSQAGKELEKAKEVSENSAGH 379

Query: 211 RDLEIKLFSTSPPATNSDRRSFFDEKSE-SAVNRCTITSYDTVNSA 345
                   +TSP +   DR S     S  S V+ C+ TS D  +S+
Sbjct: 380 NSSWFSRRTTSP-SPEPDRLSGSSSDSRASIVSSCSTTSTDDSSSS 424


>AL121914-13|CAC12719.2|  786|Homo sapiens chromosome 20 open
           reading frame 32 protein.
          Length = 786

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
 Frame = +1

Query: 31  SWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGH 210
           S+  PSS +  R E  N++    PN+Y +     +A+S   ++   LE + E+  +  GH
Sbjct: 328 SYKVPSSFLIPRVEQQNTK----PNIYDI----PKATSSVSQAGKELEKAKEVSENSAGH 379

Query: 211 RDLEIKLFSTSPPATNSDRRSFFDEKSE-SAVNRCTITSYDTVNSA 345
                   +TSP +   DR S     S  S V+ C+ TS D  +S+
Sbjct: 380 NSSWFSRRTTSP-SPEPDRLSGSSSDSRASIVSSCSTTSTDDSSSS 424


>Z71621-1|CAA96283.1|  372|Homo sapiens Wnt-13 protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/72 (19%), Positives = 32/72 (44%)
 Frame = +1

Query: 199 INGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVK 378
           ++G   + I +F        S R +     ++SA N+C       + + ++C+N+   V 
Sbjct: 2   LDGLGVVAISIFGIQLKTEGSLRTAVPGIPTQSAFNKCLQRYIGALGARVICDNIPGLVS 61

Query: 379 MDGKKCEEFSDV 414
              + C+ + D+
Sbjct: 62  RQRQLCQRYPDI 73


>AL354760-3|CAI22309.1|  372|Homo sapiens wingless-type MMTV
           integration site family, member 2B protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/72 (19%), Positives = 32/72 (44%)
 Frame = +1

Query: 199 INGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVK 378
           ++G   + I +F        S R +     ++SA N+C       + + ++C+N+   V 
Sbjct: 2   LDGLGVVAISIFGIQLKTEGSLRTAVPGIPTQSAFNKCLQRYIGALGARVICDNIPGLVS 61

Query: 379 MDGKKCEEFSDV 414
              + C+ + D+
Sbjct: 62  RQRQLCQRYPDI 73


>AL109932-7|CAI22706.1|  372|Homo sapiens wingless-type MMTV
           integration site family, member 2B protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/72 (19%), Positives = 32/72 (44%)
 Frame = +1

Query: 199 INGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVK 378
           ++G   + I +F        S R +     ++SA N+C       + + ++C+N+   V 
Sbjct: 2   LDGLGVVAISIFGIQLKTEGSLRTAVPGIPTQSAFNKCLQRYIGALGARVICDNIPGLVS 61

Query: 379 MDGKKCEEFSDV 414
              + C+ + D+
Sbjct: 62  RQRQLCQRYPDI 73


>AB045116-1|BAB11984.1|  372|Homo sapiens WNT-2B Isoform 1 protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/72 (19%), Positives = 32/72 (44%)
 Frame = +1

Query: 199 INGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVK 378
           ++G   + I +F        S R +     ++SA N+C       + + ++C+N+   V 
Sbjct: 2   LDGLGVVAISIFGIQLKTEGSLRTAVPGIPTQSAFNKCLQRYIGALGARVICDNIPGLVS 61

Query: 379 MDGKKCEEFSDV 414
              + C+ + D+
Sbjct: 62  RQRQLCQRYPDI 73


>X63131-1|CAA44841.1|  633|Homo sapiens My1 (PML) protein.
          Length = 633

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 498 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 557

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 558 VISSSEDSDAENSSSRELDDSSSESS 583


>M79462-1|AAA60388.1|  860|Homo sapiens PML protein.
          Length = 860

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 476 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 535

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 536 VISSSEDSDAENSSSRELDDSSSESS 561


>BC139795-1|AAI39796.1|  540|Homo sapiens PML protein protein.
          Length = 540

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 156 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 215

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 216 VISSSEDSDAENSSSRELDDSSSESS 241


>AF230411-1|AAG50190.1|  585|Homo sapiens tripartite motif protein
           TRIM19 lambda protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 450 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 509

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 510 VISSSEDSDAENSSSRELDDSSSESS 535


>AF230406-1|AAG50185.1|  633|Homo sapiens tripartite motif protein
           TRIM19 zeta protein.
          Length = 633

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 498 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 557

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 558 VISSSEDSDAENSSSRELDDSSSESS 583


>AF230401-1|AAG50180.1|  882|Homo sapiens tripartite motif protein
           TRIM19 alpha protein.
          Length = 882

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 498 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 557

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 558 VISSSEDSDAENSSSRELDDSSSESS 583


>AB209411-1|BAD92648.1|  862|Homo sapiens promyelocytic leukemia
           protein isoform 1 variant protein.
          Length = 862

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = +1

Query: 61  ERREANNSETYSAPNLYSLFPPTRRASSPEPRSP-LALEI---SSEIVTSINGHRDLEIK 228
           E R A +S     P+      P      P PRSP +  E+   +S  V S  G  +  + 
Sbjct: 478 EARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVV 537

Query: 229 LFSTS--PPATNSDRRSFFDEKSESA 300
           + S+S    A NS  R   D  SES+
Sbjct: 538 VISSSEDSDAENSSSRELDDSSSESS 563


>BC001962-1|AAH01962.1|  496|Homo sapiens exonuclease 3'-5'
           domain-like 2 protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 50  LVYQSEERQITVKLILHLICIPYSR 124
           ++Y + + QI+V L LHL+  P+SR
Sbjct: 115 VIYAARDAQISVALFLHLLGYPFSR 139


>AK001600-1|BAA91781.1|  496|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10738 fis, clone NT2RP3001427, weakly similar to
           WERNER SYNDROME HELICASE HOMOLOG. ).
          Length = 496

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 50  LVYQSEERQITVKLILHLICIPYSR 124
           ++Y + + QI+V L LHL+  P+SR
Sbjct: 115 VIYAARDAQISVALFLHLLGYPFSR 139


>AF392450-1|AAL40663.1|  950|Homo sapiens oxysterol-binding
           protein-like protein OSBPL1B protein.
          Length = 950

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 175 ISSEIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNR 309
           +S  + T    H +LE  L   SPPA+      F+D  S+S   R
Sbjct: 443 LSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESER 487


>AF323726-1|AAG53407.2|  927|Homo sapiens OSBP-related protein 1
           protein.
          Length = 927

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 175 ISSEIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNR 309
           +S  + T    H +LE  L   SPPA+      F+D  S+S   R
Sbjct: 443 LSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESER 487


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,172,722
Number of Sequences: 237096
Number of extensions: 1457680
Number of successful extensions: 3969
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3965
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)