Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J08
(481 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17540.2 68415.m02030 expressed protein 33 0.100
At2g17540.1 68415.m02029 expressed protein 33 0.100
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 31 0.30
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 31 0.30
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 31 0.30
At2g21840.1 68415.m02595 CHP-rich zinc finger protein, putative 31 0.53
At2g43220.1 68415.m05372 DC1 domain-containing protein contains ... 29 2.1
At5g18830.2 68418.m02238 squamosa promoter-binding protein-like ... 28 2.8
At5g18830.1 68418.m02237 squamosa promoter-binding protein-like ... 28 2.8
At5g49260.1 68418.m06097 hypothetical protein 28 3.7
At3g42640.1 68416.m04431 ATPase, plasma membrane-type, putative ... 27 5.0
At3g18800.1 68416.m02388 expressed protein 27 5.0
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 27 5.0
At5g48320.1 68418.m05969 DC1 domain-containing protein contains ... 27 6.5
At5g20300.1 68418.m02416 chloroplast outer membrane protein, put... 27 6.5
At4g11770.1 68417.m01876 kelch repeat-containing F-box family pr... 27 6.5
At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 27 6.5
At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative ... 27 6.5
At1g34000.2 68414.m04216 light stress-responsive one-helix prote... 27 6.5
At1g04700.1 68414.m00467 protein kinase family protein low simil... 27 6.5
At2g27120.1 68415.m03259 DNA-directed DNA polymerase epsilon cat... 27 8.7
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 27 8.7
>At2g17540.2 68415.m02030 expressed protein
Length = 275
Score = 33.1 bits (72), Expect = 0.100
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +1
Query: 94 SAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGHRDLEIKLFSTSPPATNSDRRS 273
+A L++ FP S EPR A+ S ++T +GHR+ + K TS +D
Sbjct: 115 NALELFASFPAAETVSCKEPRLIRAINNSPRVLTDCSGHRNKKQKTL-TSTMNDGNDVAG 173
Query: 274 FFDEKSESAVN 306
D + VN
Sbjct: 174 VVDSDDGTRVN 184
>At2g17540.1 68415.m02029 expressed protein
Length = 275
Score = 33.1 bits (72), Expect = 0.100
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +1
Query: 94 SAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGHRDLEIKLFSTSPPATNSDRRS 273
+A L++ FP S EPR A+ S ++T +GHR+ + K TS +D
Sbjct: 115 NALELFASFPAAETVSCKEPRLIRAINNSPRVLTDCSGHRNKKQKTL-TSTMNDGNDVAG 173
Query: 274 FFDEKSESAVN 306
D + VN
Sbjct: 174 VVDSDDGTRVN 184
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 31.5 bits (68), Expect = 0.30
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Frame = +1
Query: 7 GADTALRRSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRS-PLALEISS 183
GA + + SD S V R+ + +AP S PP + ++PE S P ++
Sbjct: 287 GAPPSYEEAVSDSRSPVYSERDGGETPQVTAPGAAS--PPPPQVAAPEAASPPTGTNTAN 344
Query: 184 EIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNV 363
T +N +++ F P RS F + + +T+ TV S +
Sbjct: 345 TTATFVNESPSQKVETFDEFDP------RSAFSAGPPAYASTDGVTAPPTVTS-MSAPTT 397
Query: 364 GSSVKMD--GKKCEEFS 408
+SV+MD G + FS
Sbjct: 398 SNSVEMDLLGSLADVFS 414
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 31.5 bits (68), Expect = 0.30
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Frame = +1
Query: 7 GADTALRRSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRS-PLALEISS 183
GA + + SD S V R+ + +AP S PP + ++PE S P ++
Sbjct: 287 GAPPSYEEAVSDSRSPVYSERDGGETPQVTAPGAAS--PPPPQVAAPEAASPPTGTNTAN 344
Query: 184 EIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNV 363
T +N +++ F P RS F + + +T+ TV S +
Sbjct: 345 TTATFVNESPSQKVETFDEFDP------RSAFSAGPPAYASTDGVTAPPTVTS-MSAPTT 397
Query: 364 GSSVKMD--GKKCEEFS 408
+SV+MD G + FS
Sbjct: 398 SNSVEMDLLGSLADVFS 414
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 31.5 bits (68), Expect = 0.30
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Frame = +1
Query: 7 GADTALRRSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRS-PLALEISS 183
GA + + SD S V R+ + +AP S PP + ++PE S P ++
Sbjct: 287 GAPPSYEEAVSDSRSPVYSERDGGETPQVTAPGAAS--PPPPQVAAPEAASPPTGTNTAN 344
Query: 184 EIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNV 363
T +N +++ F P RS F + + +T+ TV S +
Sbjct: 345 TTATFVNESPSQKVETFDEFDP------RSAFSAGPPAYASTDGVTAPPTVTS-MSAPTT 397
Query: 364 GSSVKMD--GKKCEEFS 408
+SV+MD G + FS
Sbjct: 398 SNSVEMDLLGSLADVFS 414
>At2g21840.1 68415.m02595 CHP-rich zinc finger protein, putative
Length = 746
Score = 30.7 bits (66), Expect = 0.53
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 346 IVCNNVGSSVKM--DGKKCEEFSDVGCARQLSLPANLRA 456
+VC N+ S K + KCE + D+GCA Q ++ + A
Sbjct: 82 VVCGNMSSGAKYYYECSKCEIYLDLGCALQKNIATSWEA 120
>At2g43220.1 68415.m05372 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 538
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/84 (21%), Positives = 35/84 (41%)
Frame = +1
Query: 208 HRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVKMDG 387
H + +++ PP+ + ++ S K + V C + ++ + C N K+D
Sbjct: 64 HPNHPLEVLLQGPPSYSDEKCSLCQRKLSNFVYHCKLCNFSI---DMECGNRPPPHKVDH 120
Query: 388 KKCEEFSDVGCARQLSLPANLRAT 459
KC E + R++S N T
Sbjct: 121 PKCHEHALTLMGREVSFTCNACGT 144
>At5g18830.2 68418.m02238 squamosa promoter-binding protein-like 7
(SPL7) identical to squamosa promoter binding
protein-like 7 [Arabidopsis thaliana] GI:5931635;
contains Pfam profile PF03110: SBP domain
Length = 775
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 283 EKSESAVNRCTITSYDTVNSAIVCNNVGS 369
E++E VNRC I Y+ V + ++ NN S
Sbjct: 593 ERTEQPVNRCQIKRYNRVLNYLIQNNSAS 621
>At5g18830.1 68418.m02237 squamosa promoter-binding protein-like 7
(SPL7) identical to squamosa promoter binding
protein-like 7 [Arabidopsis thaliana] GI:5931635;
contains Pfam profile PF03110: SBP domain
Length = 801
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 283 EKSESAVNRCTITSYDTVNSAIVCNNVGS 369
E++E VNRC I Y+ V + ++ NN S
Sbjct: 593 ERTEQPVNRCQIKRYNRVLNYLIQNNSAS 621
>At5g49260.1 68418.m06097 hypothetical protein
Length = 210
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 202 NGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVNRCTITSYDTVNSAIVCNNVGSSVKM 381
NGH + +F + + R SF D++ ++ T+ S D N I C VK+
Sbjct: 144 NGHEVVPSPIFHSPFSSNKYQRSSFLDQQESGGLSYNTVFSNDESNIGI-CKKGSRWVKI 202
Query: 382 DGK 390
K
Sbjct: 203 GAK 205
>At3g42640.1 68416.m04431 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H+-ATPase from [Lycopersicon esculentum] GI:1621440,
[Solanum tuberosum] GI:435001, SP|Q03194 {Nicotiana
plumbaginifolia}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 948
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 28 RSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVT 195
RS VPE+ + ++ + L LF P R S+ R L L ++ +++T
Sbjct: 459 RSLGVAQQTVPEKTKESDGSPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMIT 514
>At3g18800.1 68416.m02388 expressed protein
Length = 197
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 140 VHQSLVLLLRWKYRQRSLRRSMGIATWKLNYFQPRL 247
V Q+L + +KY++R + ++G+AT KL + + R+
Sbjct: 98 VAQTLRCINGFKYQRRCHKLTLGLATHKLRFIKSRI 133
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 27.5 bits (58), Expect = 5.0
Identities = 26/92 (28%), Positives = 37/92 (40%)
Frame = +1
Query: 31 SWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVTSINGH 210
S P S E + S+P S PP+ SSPE SPLA S E+ + +
Sbjct: 40 STDSPLSPSSSPEEDSPLSPSSSPEEDSPLPPS---SSPEEDSPLAPSSSPEVDSPLAPS 96
Query: 211 RDLEIKLFSTSPPATNSDRRSFFDEKSESAVN 306
E+ S PP+++ + S S N
Sbjct: 97 SSPEVD--SPQPPSSSPEADSPLPPSSSPEAN 126
>At5g48320.1 68418.m05969 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 977
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 92 ILHLICIPYSRQPEEPVHQSLVLLLRWKYRQRSLRRSMGIATWK 223
ILH C SR+ PVH L+ L+ +S I +W+
Sbjct: 726 ILHEECAKLSRKIHHPVHPHLLTLVGRSDLVMDATKSCSICSWR 769
>At5g20300.1 68418.m02416 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 793
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 37 SDPSSRVPERREANNSETYSAPNLYSLF-PPTRRASSPEPRSPLA 168
SDP R P + + N+S+ +AP +L PP +S E PL+
Sbjct: 24 SDPFFRDPHQEQDNHSQAPAAPQPVTLSEPPCSTSSDLEILPPLS 68
>At4g11770.1 68417.m01876 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 396
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 244 PPATNSDRRSFFDEKSESAVNRCTI-TSYDTVNSAIVCNNVGSSVKMDG 387
P TN R + +EK S +I TS D S + CN +GS + M G
Sbjct: 108 PILTNLTRATSKEEKKLSENLMVSIPTSNDCPLSGLTCNTIGSYIYMIG 156
>At2g21830.1 68415.m02594 DC1 domain-containing protein contains
Pfam profilePF03107: DC1 domain
Length = 569
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 313 TITSYDTVNSAIVCN---NVGSSVKMDGKKCEEFSDVGCA 423
++ YD IVC+ N+ S + K+CE + D+GCA
Sbjct: 68 SLFQYDRKPGYIVCSCCGNMSSCSFYECKECEIYLDLGCA 107
>At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from [Phaseolus vulgaris]
GI:758250, [Lycopersicon esculentum] GI:1621440,
SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum
tuberosum] GI:435001; contains InterPro accession
IPR001757: ATPase, E1-E2 type
Length = 949
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 28 RSWSDPSSRVPERREANNSETYSAPNLYSLFPPTRRASSPEPRSPLALEISSEIVT 195
RS RVPE+ + + + L LF P R S+ R L L ++ +++T
Sbjct: 459 RSLGVARQRVPEKDKESAGTPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMIT 514
>At1g34000.2 68414.m04216 light stress-responsive one-helix protein
(OHP2) contains similarity to photosystem II 22 kDa
protein GI:6006279 from [Arabidopsis thaliana]
Length = 145
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 121 PPTRRASSPEPRSP--LALEISSEIVTSINGHRD--LEIKLFSTSPPATNSDRRSFFDEK 288
PP++ +SSP P P A+ + + VT++ R E++ + + + FF +
Sbjct: 67 PPSQPSSSPPPSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQ 126
Query: 289 SESAVNRCTITSYDTVNSAI 348
++ ++ SYD +NS I
Sbjct: 127 PKNEISNGRYLSYD-LNSCI 145
>At1g04700.1 68414.m00467 protein kinase family protein low
similarity to EDR1 [Arabidopsis thaliana] GI:11127925;
contains Pfam profile: PF00069 Eukaryotic protein kinase
domain
Length = 1042
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 175 ISSEIVTSINGHRDLEIKLFSTSPPATNSDRRSFFDEKSESAVN 306
+S+ IV +N D + K ++ TN+D S +EK + + N
Sbjct: 695 LSATIVPQVNRESDDDHKSYTREKEITNADHESEMEEKYKKSRN 738
>At2g27120.1 68415.m03259 DNA-directed DNA polymerase epsilon
catalytic subunit, putative similar to SP|Q07864 DNA
polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA
polymerase II subunit A) {Homo sapiens}; contains Pfam
profiles: PF03175 DNA polymerase type B, organellar and
viral, PF00136 DNA polymerase family B, PF03104 DNA
polymerase family B, exonuclease domain
Length = 2138
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 55 VPERREANNSETYSAPNLYSLFPPTRRASSPEPR-SPLALE--ISSEIVTSING 207
VP+ + NN ET+ A LFP R S E + LA+ + S++V+ + G
Sbjct: 1633 VPDLGDINNEETFLADETSLLFPGAYRKVSVELKVHRLAVNALLKSDLVSEMEG 1686
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 37 SDPSSRVPERREANNSETYSAPNLYSLFPPT 129
S PSS + ++SE+Y APNL + PT
Sbjct: 693 STPSSEPTQVPTPSSSESYQAPNLSPVQAPT 723
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,517,710
Number of Sequences: 28952
Number of extensions: 215847
Number of successful extensions: 871
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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