Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J06
(450 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 265 3e-70
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 262 3e-69
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 203 3e-63
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 241 4e-63
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 208 4e-53
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 200 1e-50
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 198 6e-50
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 192 3e-48
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 186 1e-46
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 117 9e-46
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 161 5e-39
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 149 4e-35
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 108 6e-23
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 105 3e-22
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 102 4e-21
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 99 2e-20
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 99 5e-20
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 99 5e-20
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 99 5e-20
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 90 2e-17
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 88 7e-17
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 87 1e-16
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 85 5e-16
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 85 9e-16
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 82 5e-15
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 79 3e-14
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 78 1e-13
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 78 1e-13
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 76 3e-13
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 71 1e-11
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 70 2e-11
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 60 2e-08
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 57 2e-07
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.019
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 36 0.31
UniRef50_A5NNX2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.94
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 1.6
UniRef50_Q0U2Z5 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_UPI0000F32FE2 Cluster: UPI0000F32FE2 related cluster; n... 33 2.9
UniRef50_UPI00006DD0EE Cluster: hypothetical protein Bmal2_03001... 33 3.8
UniRef50_Q03C76 Cluster: Predicted membrane protein; n=1; Lactob... 33 3.8
UniRef50_A5ZHX4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1; Acantha... 33 3.8
UniRef50_Q1NH40 Cluster: TonB-dependent receptor; n=1; Sphingomo... 32 5.0
UniRef50_Q381Q5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_Q05223 Cluster: Major head protein Gp17; n=5; Siphoviri... 32 5.0
UniRef50_Q59046 Cluster: DNA topoisomerase 1; n=6; Methanococcal... 32 5.0
UniRef50_Q95108 Cluster: Thioredoxin, mitochondrial precursor; n... 32 5.0
UniRef50_Q88TN6 Cluster: Integral membrane protein; n=1; Lactoba... 32 6.6
UniRef50_A6S3K5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q5SW25 Cluster: POM121-like protein 2; n=3; Murinae|Rep... 32 6.6
UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precurs... 32 6.6
UniRef50_Q6MJE5 Cluster: Sensor protein; n=1; Bdellovibrio bacte... 31 8.8
UniRef50_A4Y0X1 Cluster: Peptidoglycan-binding LysM; n=1; Pseudo... 31 8.8
UniRef50_A3ZWA6 Cluster: Putative uncharacterized protein; n=1; ... 31 8.8
UniRef50_Q170U2 Cluster: Multicopper oxidase; n=1; Aedes aegypti... 31 8.8
UniRef50_Q5JED7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.8
UniRef50_O65482 Cluster: Putative cysteine-rich receptor-like pr... 31 8.8
UniRef50_A7RW30 Cluster: Predicted protein; n=2; Nematostella ve... 28 9.0
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 265 bits (650), Expect = 3e-70
Identities = 119/149 (79%), Positives = 134/149 (89%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIV 65
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 363
QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 364 VRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
V++ G K VP+LVTHDGRT+RYPDPLI
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 262 bits (641), Expect = 3e-69
Identities = 117/149 (78%), Positives = 132/149 (88%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++HLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 363
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 364 VRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
VR++ G K +P+LVTHD RT+RYPDPLI
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLI 154
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 203 bits (495), Expect(2) = 3e-63
Identities = 93/115 (80%), Positives = 103/115 (89%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++HLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 348
QR IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Score = 60.9 bits (141), Expect(2) = 3e-63
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +1
Query: 346 KYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
+YKLCKV+++ G K +P+LVTHD RT+RYPDPLI
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLI 186
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 241 bits (591), Expect = 4e-63
Identities = 109/149 (73%), Positives = 126/149 (84%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++HLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISIL 65
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 363
QR I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 364 VRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
VR + G K +PYL T+DGRT+RYPDPLI
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLI 154
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 208 bits (508), Expect = 4e-53
Identities = 90/145 (62%), Positives = 112/145 (77%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
HLKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IVK
Sbjct: 8 HLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKN 67
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
R IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK+
Sbjct: 68 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIE 127
Query: 370 RVATGPKSVPYLVTHDGRTLRYPDP 444
+ G ++PY+VTHDGRT+RYP P
Sbjct: 128 KRVLGTGAIPYIVTHDGRTIRYPHP 152
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 200 bits (488), Expect = 1e-50
Identities = 89/147 (60%), Positives = 111/147 (75%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
HLKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+
Sbjct: 22 HLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKR 81
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
RL+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V
Sbjct: 82 RLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVN 141
Query: 370 RVATGPKSVPYLVTHDGRTLRYPDPLI 450
+ G K +P++VTHDGRT+ Y DP +
Sbjct: 142 QFKIGAKGIPHVVTHDGRTISYVDPSV 168
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 198 bits (482), Expect = 6e-50
Identities = 95/149 (63%), Positives = 113/149 (75%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI
Sbjct: 17 KQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKIC 75
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 363
Q IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK
Sbjct: 76 MQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCK 135
Query: 364 VRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
+R++ K +P+LV HD T+R+PD LI
Sbjct: 136 MRKIFVRAKGIPHLVIHDIHTVRHPDSLI 164
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 192 bits (468), Expect = 3e-48
Identities = 85/149 (57%), Positives = 115/149 (77%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++H KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+
Sbjct: 6 KKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNIL 65
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 363
K+ I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCK
Sbjct: 66 KKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCK 125
Query: 364 VRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
V RV+ G K +PY+VTHDGRT+R+P+ LI
Sbjct: 126 VIRVSIGSKGIPYIVTHDGRTIRFPNLLI 154
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 186 bits (454), Expect = 1e-46
Identities = 88/148 (59%), Positives = 105/148 (70%)
Frame = +1
Query: 1 AEEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
A++HLKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I
Sbjct: 2 AKKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMI 61
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
++Q L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL
Sbjct: 62 LRQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLM 121
Query: 361 KVRRVATGPKSVPYLVTHDGRTLRYPDP 444
KV + T VP VTHDG +RYPDP
Sbjct: 122 KVVNLYTATGRVPVAVTHDGHRIRYPDP 149
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 117 bits (281), Expect(2) = 9e-46
Identities = 53/69 (76%), Positives = 59/69 (85%)
Frame = +1
Query: 7 EHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 186
+HLK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRM 66
Query: 187 QRLIKVDGK 213
Q IK+DGK
Sbjct: 67 QHFIKMDGK 75
Score = 88.6 bits (210), Expect(2) = 9e-46
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 298 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
D KGRF +HRITPEEAKYKL KVR++ G K +P+LVTHD RT+RYPDPLI
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 126
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 161 bits (392), Expect = 5e-39
Identities = 88/180 (48%), Positives = 113/180 (62%), Gaps = 31/180 (17%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLD-------------------------KLGGVY----APRPSTGPH 96
++HLKR+NAPK+WML+ KL +Y A RPS GPH
Sbjct: 87 KKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPSQGPH 146
Query: 97 KLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSIEK 270
KLRE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G MDVV IEK
Sbjct: 147 KLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEK 206
Query: 271 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLI 450
T++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD RT+R+P+P I
Sbjct: 207 TDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEI 266
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 149 bits (360), Expect = 4e-35
Identities = 70/148 (47%), Positives = 101/148 (68%)
Frame = +1
Query: 7 EHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 186
+HLKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+
Sbjct: 7 DHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILA 66
Query: 187 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 366
++ IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L KV
Sbjct: 67 EKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV 126
Query: 367 RRVATGPKSVPYLVTHDGRTLRYPDPLI 450
+ + +PY+V+ G ++R+ DP I
Sbjct: 127 TKKYEN-QGIPYIVSSCGLSIRFCDPAI 153
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 108 bits (259), Expect = 6e-23
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
+ H+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E KI
Sbjct: 9 KRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKI 68
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ + I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C
Sbjct: 69 ITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVC 128
Query: 361 KVRRVATGPKSVPYLVTHDGR 423
+++ + HDG+
Sbjct: 129 RIKNKTYVRGGNLQITMHDGK 149
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 105 bits (253), Expect = 3e-22
Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 10 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 186
HL+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 187 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 366
+ +KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRV 122
Query: 367 RRVATGPKSVPYLVTHDGRTL 429
L HDGR L
Sbjct: 123 EGKTMVKGGRIQLHFHDGRNL 143
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 102 bits (244), Expect = 4e-21
Identities = 53/140 (37%), Positives = 76/140 (54%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
HL+R AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+
Sbjct: 11 HLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILAS 70
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
R+I+VDG+V TD +P G MDV+ I + +R++ D + I PEEA YKL ++R
Sbjct: 71 RVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIR 130
Query: 370 RVATGPKSVPYLVTHDGRTL 429
R T HDGR +
Sbjct: 131 RKMTVKNGDLQFTLHDGRNV 150
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 99 bits (238), Expect = 2e-20
Identities = 50/140 (35%), Positives = 73/140 (52%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
HL+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C++
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIE 122
Query: 370 RVATGPKSVPYLVTHDGRTL 429
L HDGR +
Sbjct: 123 DKTMVKAGKIQLNLHDGRNI 142
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 98.7 bits (235), Expect = 5e-20
Identities = 49/143 (34%), Positives = 77/143 (53%)
Frame = +1
Query: 1 AEEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
+ +HLK APK W + + +PS G H + L L + +R+ LK A E +I
Sbjct: 6 SRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRI 65
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ + VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLC
Sbjct: 66 INSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLC 123
Query: 361 KVRRVATGPKSVPYLVTHDGRTL 429
K+ +T + HDG+ +
Sbjct: 124 KIVNKSTIKGGKIQVNLHDGKNV 146
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 98.7 bits (235), Expect = 5e-20
Identities = 51/139 (36%), Positives = 78/139 (56%)
Frame = +1
Query: 7 EHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 186
+HLKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E KI++
Sbjct: 8 KHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQ 67
Query: 187 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 366
I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK+
Sbjct: 68 TGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKI 125
Query: 367 RRVATGPKSVPYLVTHDGR 423
L HDGR
Sbjct: 126 VNKTVVKGGNIQLNLHDGR 144
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 98.7 bits (235), Expect = 5e-20
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
+ LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T E K++
Sbjct: 7 QRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLI 66
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLC 360
+ +VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K
Sbjct: 67 SEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPV 125
Query: 361 KVRRVATGPKSVPYLVTHDGRTL--RYPDP 444
++ T L HDGR + R DP
Sbjct: 126 RIENKTTVKGGHVQLNLHDGRNILVRVKDP 155
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 89.8 bits (213), Expect = 2e-17
Identities = 47/140 (33%), Positives = 72/140 (51%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
HLKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIV 122
Query: 370 RVATGPKSVPYLVTHDGRTL 429
L HDG T+
Sbjct: 123 NKTALRGGKIQLNLHDGTTM 142
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 88.2 bits (209), Expect = 7e-17
Identities = 46/147 (31%), Positives = 76/147 (51%)
Frame = +1
Query: 1 AEEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
+ H+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E ++
Sbjct: 2 SSSHMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRM 61
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ R + VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC
Sbjct: 62 LATRQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLC 119
Query: 361 KVRRVATGPKSVPYLVTHDGRTLRYPD 441
+V +T + HDGR + D
Sbjct: 120 RVMGKSTITDGKTQIHLHDGRNILVSD 146
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 87.4 bits (207), Expect = 1e-16
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
+ HL+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV +
Sbjct: 6 KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYL 65
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ + VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K
Sbjct: 66 LNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYG 125
Query: 361 K-VRRVATGPKSVPYLVTHDGRT 426
K +R+V+ + Y +T DGRT
Sbjct: 126 KIIRKVSVRGGKIQYTLT-DGRT 147
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 85.4 bits (202), Expect = 5e-16
Identities = 51/140 (36%), Positives = 68/140 (48%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
H+ R AP + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
+ VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIM 122
Query: 370 RVATGPKSVPYLVTHDGRTL 429
T V L DGR +
Sbjct: 123 NKTTLKSGVLQLNLEDGRNI 142
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 84.6 bits (200), Expect = 9e-16
Identities = 43/140 (30%), Positives = 70/140 (50%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
H KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRIN 121
Query: 370 RVATGPKSVPYLVTHDGRTL 429
T L +DG +
Sbjct: 122 NKTTVKGGKIQLNLNDGTNI 141
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 82.2 bits (194), Expect = 5e-15
Identities = 45/125 (36%), Positives = 67/125 (53%)
Frame = +1
Query: 7 EHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 186
++LKRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+
Sbjct: 3 KYLKRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILH 61
Query: 187 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 366
QR + V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK+
Sbjct: 62 QRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKI 121
Query: 367 RRVAT 381
R T
Sbjct: 122 RNKTT 126
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 79.4 bits (187), Expect = 3e-14
Identities = 45/137 (32%), Positives = 70/137 (51%)
Frame = +1
Query: 16 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 195
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 196 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 375
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KVR
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 376 ATGPKSVPYLVTHDGRT 426
P + L THDGRT
Sbjct: 124 VIAPGNRIQLGTHDGRT 140
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 77.8 bits (183), Expect = 1e-13
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 16 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 195
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 196 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VRR 372
+KVDG++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K V++
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 126
Query: 373 VATGPKSVPYLVTHDGRTL 429
G + L HDG+T+
Sbjct: 127 TIIGTGKI-QLGFHDGKTI 144
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 77.8 bits (183), Expect = 1e-13
Identities = 40/122 (32%), Positives = 66/122 (54%)
Frame = +1
Query: 16 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 195
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 196 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 375
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 376 AT 381
T
Sbjct: 124 TT 125
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 76.2 bits (179), Expect = 3e-13
Identities = 35/119 (29%), Positives = 62/119 (52%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
H KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSE 63
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 366
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC++
Sbjct: 64 GNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRI 121
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 70.9 bits (166), Expect = 1e-11
Identities = 41/144 (28%), Positives = 67/144 (46%)
Frame = +1
Query: 10 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 189
H KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 4 HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62
Query: 190 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 369
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 63 DNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIV 122
Query: 370 RVATGPKSVPYLVTHDGRTLRYPD 441
L HDG TL D
Sbjct: 123 TKTHVSGGDVQLGLHDGETLIVED 146
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 70.1 bits (164), Expect = 2e-11
Identities = 36/143 (25%), Positives = 68/143 (47%)
Frame = +1
Query: 4 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 183
++H KR+++ K G++ + S+GPH + + L+ ++ A E K+V
Sbjct: 6 KKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVV 65
Query: 184 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 363
K + V+GK +P MD +S N+ +R++ G+ T++ I E K+CK
Sbjct: 66 KTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICK 125
Query: 364 VRRVATGPKSVPYLVTHDGRTLR 432
V ++ ++T D R L+
Sbjct: 126 VIKIINASSKNKIIITDDLRELK 148
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 60.5 bits (140), Expect = 2e-08
Identities = 38/139 (27%), Positives = 60/139 (43%)
Frame = +1
Query: 13 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 192
LKR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 10 LKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSG 69
Query: 193 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRR 372
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 70 NVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRVTS 129
Query: 373 VATGPKSVPYLVTHDGRTL 429
+ + HDGR+L
Sbjct: 130 KTSISGGRTQIGFHDGRSL 148
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 56.8 bits (131), Expect = 2e-07
Identities = 40/138 (28%), Positives = 63/138 (45%)
Frame = +1
Query: 16 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 195
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 196 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 375
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +V+
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 376 ATGPKSVPYLVTHDGRTL 429
+ HDG T+
Sbjct: 124 TYVKGGRIQISFHDGSTM 141
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.019
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 82 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 261
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 262 IEKTNELFRLIYDVKG 309
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 36.3 bits (80), Expect = 0.31
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = -1
Query: 399 RHALGAGRDAPHLAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNV 250
RHAL APHLAQLVL F D V +E S ++ E I +G +V
Sbjct: 144 RHALVPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_A5NNX2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 105
Score = 34.7 bits (76), Expect = 0.94
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 363 GAARRDRPQERAVPGDARRAHAPVPG 440
G RRDRPQER P RRA P+ G
Sbjct: 70 GGDRRDRPQERLAPRSLRRAERPLTG 95
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 1.6
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 40 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 219
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 220 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 309
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_Q0U2Z5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 654
Score = 33.5 bits (73), Expect = 2.2
Identities = 28/96 (29%), Positives = 42/96 (43%)
Frame = -2
Query: 290 KRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGK 111
+R++ V S +T+ +P G + S P+ +R F LS S + ++T GK
Sbjct: 286 RRHDYDVQSTETSLSSPRGLLKSPIPPPTVTVRSEFPTLSRSRQQQSLTCLITVEVTEGK 345
Query: 110 HSRSLWGPVEGRGAYTPPSLSNIHALGAFKRFKCSS 3
P + RG PP S A G+F R K S
Sbjct: 346 WRAD---PEDMRGVAPPPVPSIASATGSFSRGKSPS 378
>UniRef50_UPI0000F32FE2 Cluster: UPI0000F32FE2 related cluster; n=1;
Bos taurus|Rep: UPI0000F32FE2 UniRef100 entry - Bos
Taurus
Length = 706
Score = 33.1 bits (72), Expect = 2.9
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 306 RKVHYPPYHT*RSQVQAVQGAAR-RDRPQERAVPGDARRAHAPVPGP 443
R V PP H + VQG R RP+ R G A RA P PGP
Sbjct: 140 RTVWMPPCHPASRRGDPVQGLPHPRPRPRSRRA-GPAHRARGPAPGP 185
>UniRef50_UPI00006DD0EE Cluster: hypothetical protein
Bmal2_03001706; n=1; Burkholderia mallei 2002721280|Rep:
hypothetical protein Bmal2_03001706 - Burkholderia
mallei 2002721280
Length = 356
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 433 TGACARRASPGTARSWGRSRRAAPCTACTW 344
TGA A+ A+P +RSW RSR + +C W
Sbjct: 307 TGAGAQHAAPSWSRSWSRSRSWSWSWSCGW 336
>UniRef50_Q03C76 Cluster: Predicted membrane protein; n=1;
Lactobacillus casei ATCC 334|Rep: Predicted membrane
protein - Lactobacillus casei (strain ATCC 334)
Length = 981
Score = 32.7 bits (71), Expect = 3.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 227 GSVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSL 96
GS TFP L + + I+ LP+S + FR ITSG S ++
Sbjct: 891 GSGGTFPMELTNQFYNIIHPFLPMSYSIMNFRNAITSGIASNTV 934
>UniRef50_A5ZHX4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 189
Score = 32.7 bits (71), Expect = 3.8
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -2
Query: 362 LHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCF 183
LH LYLA + W IK F+ TS+ Y + +P L R
Sbjct: 110 LHDLYLADIHIANWGRKFAERECIKSEQLFISRQFKTSLE--RYQDLIADYPDILQRVPL 167
Query: 182 TILSTSLPVS-AYLSRFRRKI 123
I+++ L +S LSR R KI
Sbjct: 168 GIIASYLGISQVSLSRIRAKI 188
>UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Cysteinyl-tRNA
synthetase - Mimivirus
Length = 509
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 43 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKV 204
+LDKLG +Y S+ HK+++ + ++I R++L+ ++ +K++L +
Sbjct: 421 LLDKLGFIYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSPGIKKQLFDI 474
>UniRef50_Q1NH40 Cluster: TonB-dependent receptor; n=1; Sphingomonas
sp. SKA58|Rep: TonB-dependent receptor - Sphingomonas
sp. SKA58
Length = 810
Score = 32.3 bits (70), Expect = 5.0
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -2
Query: 407 TRYGTLLGPVATRRTLHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINPAGYV 228
T +G L P T + Y + S + VN T ++ F ++ D SIN GY+
Sbjct: 415 TDFGFNLAPANTNL---ATYKSESKALFAQVNYSLTERLRVTGGFRYTWDKRSINRMGYI 471
Query: 227 GSVRTFPSTLMR--RCFTILSTSL 162
G + F + + R T+ +T L
Sbjct: 472 GGIPGFSGSFVSNGRLITLPATGL 495
>UniRef50_Q381Q5 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 347
Score = 32.3 bits (70), Expect = 5.0
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = -2
Query: 389 LGPVATRRTLHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTF 210
LG V L+ Y+ I LP + ++ N FV ++ S PAG G V
Sbjct: 166 LGVVMEECNLYGAYIPGHPHALLIAYLPHSPWVLLRNLFVSNLTKISECPAGGEGGVNKV 225
Query: 209 PSTLMRRCFTI 177
S ++RR I
Sbjct: 226 DSLVLRRTLVI 236
>UniRef50_Q05223 Cluster: Major head protein Gp17; n=5;
Siphoviridae|Rep: Major head protein Gp17 -
Mycobacteriophage L5
Length = 326
Score = 32.3 bits (70), Expect = 5.0
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 275 FVFSMDTTSINPAGYVGSVRTFPSTLMRRCF---TILSTSLPVSAYLSRFRRKIT 120
FV S +T NPA Y+G++RT +T F I T P +L++ ++++
Sbjct: 104 FVASAETVRANPANYLGTMRTKVATAFAMAFDNAAINGTDSPFPTFLAQTTKEVS 158
>UniRef50_Q59046 Cluster: DNA topoisomerase 1; n=6;
Methanococcales|Rep: DNA topoisomerase 1 - Methanococcus
jannaschii
Length = 761
Score = 32.3 bits (70), Expect = 5.0
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 79 PSTGPHKLRECLPLVIFLRNRLK-YALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDV 255
P T KL + + + N +K + + G +I+K+ L V+GK + DP +PA +
Sbjct: 316 PRTSSQKLPKDRKYLEDILNIIKNHPVYGKWAERILKENLKPVEGK-KEDPAHPAIHIVD 374
Query: 256 VSIEKTNELFRLIYDVKGRFTI 321
+ E+ +E + IYD+ R T+
Sbjct: 375 IPKEELSEKEKEIYDLIARRTL 396
>UniRef50_Q95108 Cluster: Thioredoxin, mitochondrial precursor;
n=10; Euteleostomi|Rep: Thioredoxin, mitochondrial
precursor - Bos taurus (Bovine)
Length = 166
Score = 32.3 bits (70), Expect = 5.0
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2
Query: 146 LSRFRRKITSGKHSRSLWGPVEGRGAYTP 60
L RF I SGK S+S W PV R TP
Sbjct: 7 LRRFLTSIISGKPSQSRWAPVASRALQTP 35
>UniRef50_Q88TN6 Cluster: Integral membrane protein; n=1;
Lactobacillus plantarum|Rep: Integral membrane protein -
Lactobacillus plantarum
Length = 1106
Score = 31.9 bits (69), Expect = 6.6
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -2
Query: 227 GSVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPPSLS 48
GS TFP + + F + LP++ + FR+ +T G S W + T SL
Sbjct: 1019 GSGGTFPMEITNKFFNAIHPYLPLTYSIQAFRQALTGGWGSGIFWSSIVVLAGITIVSLG 1078
Query: 47 NIHALGAF 24
+ A F
Sbjct: 1079 LLWASMVF 1086
>UniRef50_A6S3K5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 571
Score = 31.9 bits (69), Expect = 6.6
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -2
Query: 308 PFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCFTILSTS 165
P +K +NS S+DTTS NP+ Y S T T+ + +I STS
Sbjct: 301 PTYESVKSSNSGCKSLDTTSYNPSAYKISDATTCETINEKETSISSTS 348
>UniRef50_Q5SW25 Cluster: POM121-like protein 2; n=3; Murinae|Rep:
POM121-like protein 2 - Mus musculus (Mouse)
Length = 972
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 245 NPAGYVGSV-RTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPV 84
NP +V R FP M+R + SLP + S +R I S +H R+ W PV
Sbjct: 66 NPTAFVSEAWRRFP---MKRPQNPIMGSLPSDWWESYLKRNIWSLRHPRATWSPV 117
>UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precursor;
n=17; Amniota|Rep: Uncharacterized protein CXorf36
precursor - Homo sapiens (Human)
Length = 182
Score = 31.9 bits (69), Expect = 6.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 229 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 375
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>UniRef50_Q6MJE5 Cluster: Sensor protein; n=1; Bdellovibrio
bacteriovorus|Rep: Sensor protein - Bdellovibrio
bacteriovorus
Length = 622
Score = 31.5 bits (68), Expect = 8.8
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 401 YGTLLGPVATRRT--LHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFS 264
Y LLG T++ +S + AS GV +++ F SY+ N+ FVFS
Sbjct: 181 YNLLLGLFTTQKDHLSYSFFAASFGVTALVLHGVFDSYLLPNSKFVFS 228
>UniRef50_A4Y0X1 Cluster: Peptidoglycan-binding LysM; n=1;
Pseudomonas mendocina ymp|Rep: Peptidoglycan-binding
LysM - Pseudomonas mendocina ymp
Length = 744
Score = 31.5 bits (68), Expect = 8.8
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 160 GNEVLKIVKQRL-IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI----YDVKGRFTIH 324
G+ + I + RL + G++ P GF VV +EKT EL +L+ DV R+ +
Sbjct: 590 GDFGITIARDRLAVNCKGRLVFGPGASGGFSTVVDLEKTYELLKLVCEALADVDYRYLL- 648
Query: 325 RITPEEAKYKLCKVRRVATGP 387
++ E Y + +VA+ P
Sbjct: 649 GVSQEAFNYMAWGLYQVASAP 669
>UniRef50_A3ZWA6 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 1140
Score = 31.5 bits (68), Expect = 8.8
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 214 VRTDPTYPAGFMDVVSIEKTNELFRLIYD-VKGRFTIHRITPEEAKYKLCKV----RRVA 378
V + P F+ V EK +E R Y+ VK FT+ R+T EEA+ ++ K+ +V
Sbjct: 325 VNLEDGIPPDFVTTVPAEKLDE--RGEYELVKTLFTLSRMTAEEAEAEISKLIGPQGQVV 382
Query: 379 TGPKSVPYLVTHDGRTLR 432
PKS VT LR
Sbjct: 383 VLPKSKQIFVTETAGRLR 400
>UniRef50_Q170U2 Cluster: Multicopper oxidase; n=1; Aedes
aegypti|Rep: Multicopper oxidase - Aedes aegypti
(Yellowfever mosquito)
Length = 929
Score = 31.5 bits (68), Expect = 8.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 317 VNLPFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCFTILSTSLPVSAYLSR 138
+N P ++ +N V S D+ INP + S+ ++ R IL + PV YL R
Sbjct: 539 LNCPVELSVEGHNLTVISSDSFDINPVEDLASIVSYAG---ERFDFILRANQPVGNYLMR 595
Query: 137 FR 132
FR
Sbjct: 596 FR 597
>UniRef50_Q5JED7 Cluster: Putative uncharacterized protein; n=1;
Thermococcus kodakarensis KOD1|Rep: Putative
uncharacterized protein - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 164
Score = 31.5 bits (68), Expect = 8.8
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVK 306
+++RLI ++GKV+ AGF D V I K EL +LI YD K
Sbjct: 70 MRKRLIMLEGKVKHAEAGYAGFFDRVKI-KEKELEKLIEYDAK 111
>UniRef50_O65482 Cluster: Putative cysteine-rich receptor-like
protein kinase 23 precursor; n=1; Arabidopsis
thaliana|Rep: Putative cysteine-rich receptor-like
protein kinase 23 precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 830
Score = 31.5 bits (68), Expect = 8.8
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 215 TFP--STLMRRCFTILST-SLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTP 60
TFP ST M T+LST S P ++Y + F+ T+GKH + G RG +P
Sbjct: 151 TFPRSSTYMTNLITLLSTLSSPSASYSTGFQNA-TAGKHPDRVTGLFNCRGDVSP 204
>UniRef50_A7RW30 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1072
Score = 27.9 bits (59), Expect(2) = 9.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +1
Query: 73 PRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 237
P PST PH L+ +PL + + ++ L L+++ + PT P
Sbjct: 842 PHPSTSPHSLQVLIPLQVLIPLQVLIPLQVLTTLQVLTSLQVLTPSTSPRPPTSP 896
Score = 22.2 bits (45), Expect(2) = 9.0
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 70 APRPSTGPH 96
+P PSTGPH
Sbjct: 805 SPHPSTGPH 813
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,742,218
Number of Sequences: 1657284
Number of extensions: 10007074
Number of successful extensions: 35531
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 34143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35510
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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