Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J06
(450 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 4.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 4.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 4.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 4.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 4.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 4.0
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 4.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 4.0
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 7.1
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 7.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.1
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 20 9.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 9.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 9.4
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 59
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 20.6 bits (41), Expect = 7.1
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +2
Query: 47 WTSWAACTRRGPR 85
W +W CTR R
Sbjct: 190 WPAWVYCTRYSDR 202
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 20.6 bits (41), Expect = 7.1
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +1
Query: 154 LTGNEVLKIVKQRLIK 201
L N++LK++++ L+K
Sbjct: 392 LQQNKILKVIRKNLVK 407
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.1
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 441
H + P Y + +R+A P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYAD 103
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 119 SGKHSRSLWGPVEGRGAY 66
+GKH R + P + +G Y
Sbjct: 347 AGKHLRKVGDPSKRKGTY 364
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 398 GTLLGPVATRRTLHSLYLASSGVIRW 321
GT++GP L ++A+ G+ +W
Sbjct: 892 GTVIGPGTIFLMLVGAFVAAFGLDQW 917
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 398 GTLLGPVATRRTLHSLYLASSGVIRW 321
GT++GP L ++A+ G+ +W
Sbjct: 892 GTVIGPGTIFLMLVGAFVAAFGLDQW 917
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,356
Number of Sequences: 336
Number of extensions: 2274
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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