Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J06
(450 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 1.5
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 2.0
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 2.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 2.7
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 2.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 4.7
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 6.2
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 1.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R R + A PG+ R + P P P H
Sbjct: 115 RLRREPEAEPGNNRPVYIPQPRPPH 139
Score = 23.0 bits (47), Expect = 1.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R R + A PG+ R + P P P H
Sbjct: 141 RLRREPEAEPGNNRPVYIPQPRPPH 165
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + +A PG+ R + P P P H
Sbjct: 61 RREAEPKAEPGNNRPIYIPQPRPPH 85
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 89 RREAESEAEPGNNRPVYIPQPRPPH 113
Score = 21.8 bits (44), Expect = 3.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 372 RRDRPQERAVPGDARRAHAPVPGPAH 449
RR+ E A PG+ R + P P P H
Sbjct: 33 RREAKPE-AEPGNNRPIYIPQPRPPH 57
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 342 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAH 449
SQ + RR+ E A PG+ R + P P P H
Sbjct: 106 SQPRPPHPRLRREAEPE-AEPGNNRPVYIPQPRPPH 140
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 342 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAH 449
SQ + RR+ E A PG+ R + P P P H
Sbjct: 162 SQPRPPHPRLRREAEPE-AEPGNNRPVYIPQPRPPH 196
Score = 22.2 bits (45), Expect = 2.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 372 RRDRPQERAVPGDARRAHAPVPGPAH 449
RR+ E A PG+ R + P P P H
Sbjct: 32 RREAKPE-AEPGNNRPVYIPQPRPPH 56
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 60 RREAEPEAEPGNNRPVYIPQPRPPH 84
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 200 RREAEPEAEPGNNRPVYIPQPRPPH 224
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 228 RREAEPEAEPGNNRPVYIPQPRPPH 252
Score = 22.2 bits (45), Expect = 2.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 372 RRDRPQERAVPGDARRAHAPVPGPAH 449
RR+ E A PG+ R + P P P H
Sbjct: 256 RREAKPE-AKPGNNRPVYIPQPRPPH 280
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 33 RREAEPEAEPGNNRPVYIPQPRPPH 57
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 61 RREAEPEAEPGNNRPVYIPQPRPPH 85
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 89 RREAEPEAEPGNNRPVYIPQPRPPH 113
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 117 RREAEPEAEPGNNRPVYIPQPRPPH 141
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 2.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 139 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 240
R K+ LTG L K RL+ + P +P+
Sbjct: 182 RTKHRLTGETRLSATKGRLVITEPVGSVRPKFPS 215
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.2 bits (45), Expect = 2.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 372 RRDRPQERAVPGDARRAHAPVPGPAH 449
RR+ E A PG+ R + P P P H
Sbjct: 4 RREAKPE-AEPGNNRPVYIPQPRPPH 28
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 32 RREAEPEAEPGNNRPVYIPQPRPPH 56
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 60 RREAEPEAEPGNNRPVYIPQPRPPH 84
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 88 RREAEPEAEPGNNRPVYIPQPRPPH 112
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 116 RREAEPEAEPGNNRPVYIPQPRPPH 140
Score = 22.2 bits (45), Expect = 2.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 372 RRDRPQERAVPGDARRAHAPVPGPAH 449
RR+ E A PG+ R + P P P H
Sbjct: 144 RREAKPE-AEPGNNRPVYIPQPRPPH 168
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 375 RDRPQERAVPGDARRAHAPVPGPAH 449
R + A PG+ R + P P P H
Sbjct: 172 RREAEPEAEPGNNRPVYIPQPRPPH 196
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 4.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 157 TGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRF 315
T +++ + R+ ++ VRT P GF D+V +K E L + R+
Sbjct: 733 TMSQMPPTAQPRMERLAEAVRTASQIPQGFKDLVQ-KKCEERGILFMPIPNRY 784
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYD 300
VKQ ++ V+ TDP Y + + E ++ + ++ Y+
Sbjct: 145 VKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYN 184
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,827
Number of Sequences: 438
Number of extensions: 2932
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -