Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J05
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-13|CAD21675.1| 225|Caenorhabditis elegans Hypothetical p... 42 2e-04
Z68270-12|CAA92573.1| 205|Caenorhabditis elegans Hypothetical p... 42 2e-04
Z68213-7|CAD21589.1| 225|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z68213-6|CAA92442.1| 205|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF202932-1|AAK69382.1| 225|Caenorhabditis elegans ICln2 protein. 42 2e-04
AF202931-1|AAK69381.1| 205|Caenorhabditis elegans ICln1 protein. 42 2e-04
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 1.6
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 1.6
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 1.6
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 28 2.1
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 28 2.7
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 2.7
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 2.7
Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical pr... 27 6.3
>Z68270-13|CAD21675.1| 225|Caenorhabditis elegans Hypothetical
protein C01F6.8b protein.
Length = 225
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 180 EGVLLQTPSTKLLVNDQELGTGVLYITENNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 359
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 360 RE 365
+
Sbjct: 67 TD 68
>Z68270-12|CAA92573.1| 205|Caenorhabditis elegans Hypothetical
protein C01F6.8a protein.
Length = 205
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 180 EGVLLQTPSTKLLVNDQELGTGVLYITENNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 359
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 360 RE 365
+
Sbjct: 67 TD 68
>Z68213-7|CAD21589.1| 225|Caenorhabditis elegans Hypothetical
protein C01F6.8b protein.
Length = 225
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 180 EGVLLQTPSTKLLVNDQELGTGVLYITENNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 359
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 360 RE 365
+
Sbjct: 67 TD 68
>Z68213-6|CAA92442.1| 205|Caenorhabditis elegans Hypothetical
protein C01F6.8a protein.
Length = 205
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 180 EGVLLQTPSTKLLVNDQELGTGVLYITENNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 359
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 360 RE 365
+
Sbjct: 67 TD 68
>AF202932-1|AAK69382.1| 225|Caenorhabditis elegans ICln2 protein.
Length = 225
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 180 EGVLLQTPSTKLLVNDQELGTGVLYITENNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 359
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 360 RE 365
+
Sbjct: 67 TD 68
>AF202931-1|AAK69381.1| 205|Caenorhabditis elegans ICln1 protein.
Length = 205
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 180 EGVLLQTPSTKLLVNDQELGTGVLYITENNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 359
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 360 RE 365
+
Sbjct: 67 TD 68
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 316 VGADPPDGLTPPPHITLFSVIYKTPVPNS 230
+G PP PPPHI L + Y P P S
Sbjct: 97 IGMPPPPLGMPPPHIGLGAAPYAVPPPMS 125
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 316 VGADPPDGLTPPPHITLFSVIYKTPVPNS 230
+G PP PPPHI L + Y P P S
Sbjct: 120 IGMPPPPLGMPPPHIGLGAAPYAVPPPMS 148
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 316 VGADPPDGLTPPPHITLFSVIYKTPVPNS 230
+G PP PPPHI L + Y P P S
Sbjct: 370 IGMPPPPLGMPPPHIGLGAAPYAVPPPMS 398
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 246 PLCPILDH*LVILLKESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVN 91
P+CP + ++L+ E EA +SR + +CQQ ++ C K +N
Sbjct: 332 PVCPSAES--ILLVDEENEAVRCSSSRDSCPEQYMCQQAKNLEHICCTKPLN 381
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 274 ITLFSVIYKTPVPNS*SLTSNFVEG 200
I LFS+I P PN+ L S F EG
Sbjct: 12 IGLFSLISTAPAPNNVGLESEFTEG 36
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 2.7
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = -2
Query: 307 DPPDGLTPPPHITLFSVIYKTPVPNS*SLTSNFVEGV*RSTPSTGIETVDETTTIVPTKK 128
DPP T T S T P+S +S T +T I T TTTI T
Sbjct: 199 DPPTASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTST 258
Query: 127 YKTI 116
+I
Sbjct: 259 VTSI 262
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 2.7
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = -2
Query: 307 DPPDGLTPPPHITLFSVIYKTPVPNS*SLTSNFVEGV*RSTPSTGIETVDETTTIVPTKK 128
DPP T T S T P+S +S T +T I T TTTI T
Sbjct: 181 DPPTASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTST 240
Query: 127 YKTI 116
+I
Sbjct: 241 VTSI 244
>Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical
protein T25C8.1 protein.
Length = 435
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 162 LTKQP-PLCQQKNIKQYYYCYKNVNYMFELLD 70
LT+ P PL N + YC +N + E+LD
Sbjct: 171 LTQNPDPLISHHNAHSWGYCTENATWQSEILD 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,277,676
Number of Sequences: 27780
Number of extensions: 188233
Number of successful extensions: 608
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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