Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J05
         (392 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   2.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   2.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   2.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   2.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   2.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   2.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.7  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 204 KESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVNY 88
           K S+E       R+ +K+P +    +    Y  Y N NY
Sbjct: 61  KTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 204 KESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVNY 88
           K S+E       R+ +K+P +    +    Y  Y N NY
Sbjct: 61  KTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 204 KESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVNY 88
           K S+E       R+ +K+P +    +    Y  Y N NY
Sbjct: 61  KTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 204 KESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVNY 88
           K S+E       R+ +K+P +    +    Y  Y N NY
Sbjct: 61  KTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 204 KESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVNY 88
           K S+E       R+ +K+P +    +    Y  Y N NY
Sbjct: 61  KTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 204 KESEEARLPPASRQLTKQPPLCQQKNIKQYYYCYKNVNY 88
           K S+E       R+ +K+P +    +    Y  Y N NY
Sbjct: 61  KTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 6/26 (23%), Positives = 13/26 (50%)
 Frame = +1

Query: 265 IMLYGVEVSDHQVDQLLLSPSFIPLS 342
           ++ Y     +HQ     + PS+ P++
Sbjct: 534 VIQYNTRAENHQTGTAKMGPSYDPMA 559


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,802
Number of Sequences: 438
Number of extensions: 2304
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)