Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J04
(457 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 38 0.006
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 38 0.006
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 38 0.006
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 38 0.006
AY051749-1|AAK93173.1| 827|Drosophila melanogaster LD27988p pro... 29 3.9
AE014298-1356|AAF46513.2| 802|Drosophila melanogaster CG32697-P... 29 3.9
AE014298-1355|AAF46514.2| 827|Drosophila melanogaster CG32697-P... 29 3.9
AE014298-1354|AAN09610.1| 797|Drosophila melanogaster CG32697-P... 29 3.9
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB... 27 9.1
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 13 PKIFTLNNNQLVPASADNSQNLQVKYVQLPSEGGGRTSAGASVG---RGRRATGTP 171
P++ +L+ Q A+A +S LQ K +QLP G G + AG G G R+ G P
Sbjct: 1823 PELISLHRRQTSGAAAGSSSFLQGKRLQLPRSGAGPSGAGTGTGAGAAGSRSAGGP 1878
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 13 PKIFTLNNNQLVPASADNSQNLQVKYVQLPSEGGGRTSAGASVG---RGRRATGTP 171
P++ +L+ Q A+A +S LQ K +QLP G G + AG G G R+ G P
Sbjct: 1988 PELISLHRRQTSGAAAGSSSFLQGKRLQLPRSGAGPSGAGTGTGAGAAGSRSAGGP 2043
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 13 PKIFTLNNNQLVPASADNSQNLQVKYVQLPSEGGGRTSAGASVG---RGRRATGTP 171
P++ +L+ Q A+A +S LQ K +QLP G G + AG G G R+ G P
Sbjct: 1999 PELISLHRRQTSGAAAGSSSFLQGKRLQLPRSGAGPSGAGTGTGAGAAGSRSAGGP 2054
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 13 PKIFTLNNNQLVPASADNSQNLQVKYVQLPSEGGGRTSAGASVG---RGRRATGTP 171
P++ +L+ Q A+A +S LQ K +QLP G G + AG G G R+ G P
Sbjct: 1947 PELISLHRRQTSGAAAGSSSFLQGKRLQLPRSGAGPSGAGTGTGAGAAGSRSAGGP 2002
>AY051749-1|AAK93173.1| 827|Drosophila melanogaster LD27988p
protein.
Length = 827
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 76 LQVKYVQLPSEGGGRTSAGASVGRGRRATGTPVKIILNRANFTKLL 213
LQ VQLP+ GGG AGA G G PV+ ++ K L
Sbjct: 83 LQQLQVQLPAPGGG-GGAGAGGGGGGGGGAAPVRRHISHTTAVKFL 127
>AE014298-1356|AAF46513.2| 802|Drosophila melanogaster CG32697-PB,
isoform B protein.
Length = 802
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 76 LQVKYVQLPSEGGGRTSAGASVGRGRRATGTPVKIILNRANFTKLL 213
LQ VQLP+ GGG AGA G G PV+ ++ K L
Sbjct: 58 LQQLQVQLPAPGGG-GGAGAGGGGGGGGGAAPVRRHISHTTAVKFL 102
>AE014298-1355|AAF46514.2| 827|Drosophila melanogaster CG32697-PA,
isoform A protein.
Length = 827
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 76 LQVKYVQLPSEGGGRTSAGASVGRGRRATGTPVKIILNRANFTKLL 213
LQ VQLP+ GGG AGA G G PV+ ++ K L
Sbjct: 83 LQQLQVQLPAPGGG-GGAGAGGGGGGGGGAAPVRRHISHTTAVKFL 127
>AE014298-1354|AAN09610.1| 797|Drosophila melanogaster CG32697-PC,
isoform C protein.
Length = 797
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 76 LQVKYVQLPSEGGGRTSAGASVGRGRRATGTPVKIILNRANFTKLL 213
LQ VQLP+ GGG AGA G G PV+ ++ K L
Sbjct: 53 LQQLQVQLPAPGGG-GGAGAGGGGGGGGGAAPVRRHISHTTAVKFL 97
>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
protein.
Length = 5146
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +1
Query: 64 NSQNLQVKYVQLPSEGGG----RTS-AGASVGRGRRATGTP 171
+S + Q + P +GGG RT AG VG G ATGTP
Sbjct: 882 SSASQQQQQPTTPGQGGGPSTPRTQQAGGVVGSGAGATGTP 922
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.313 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,155,074
Number of Sequences: 53049
Number of extensions: 114344
Number of successful extensions: 426
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -