Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J03
         (575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9P055 Cluster: JNK1-associated membrane protein; n=35;...   105   1e-21
UniRef50_Q7PXL1 Cluster: ENSANGP00000009664; n=4; Endopterygota|...   103   3e-21
UniRef50_Q8SXK7 Cluster: RE11615p; n=2; Sophophora|Rep: RE11615p...   101   9e-21
UniRef50_A7RVN2 Cluster: Predicted protein; n=1; Nematostella ve...    85   1e-15
UniRef50_Q9BMT9 Cluster: Seven transmembrane protein; n=3; Caeno...    54   2e-06
UniRef50_Q7R186 Cluster: GLP_447_21189_18670; n=1; Giardia lambl...    35   1.6  
UniRef50_Q3AYB1 Cluster: Putative uncharacterized protein; n=2; ...    33   3.6  
UniRef50_A5UW07 Cluster: TPR repeat-containing protein; n=2; Ros...    32   8.4  

>UniRef50_Q9P055 Cluster: JNK1-associated membrane protein; n=35;
           Coelomata|Rep: JNK1-associated membrane protein - Homo
           sapiens (Human)
          Length = 326

 Score =  105 bits (251), Expect = 1e-21
 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = +2

Query: 323 NMTAVRTCPGLYCGRTQL-EDG---LWSDCGACPRGFRTNVSSYCVPCEDEPTLYDWQYL 490
           N+ A   C GLYCG+T L ++G   ++ +CG CPRG RTN   YC PC + P LYDW YL
Sbjct: 17  NLQAAHGCLGLYCGKTLLFKNGSTEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYL 76

Query: 491 GFMVLLPMVLHWFFIDMVTIGKGQDGVL 574
           GFM +LP+VLHWFFI+  + GK     L
Sbjct: 77  GFMAMLPLVLHWFFIEWYS-GKKSSSAL 103


>UniRef50_Q7PXL1 Cluster: ENSANGP00000009664; n=4;
           Endopterygota|Rep: ENSANGP00000009664 - Anopheles
           gambiae str. PEST
          Length = 298

 Score =  103 bits (247), Expect = 3e-21
 Identities = 40/72 (55%), Positives = 52/72 (72%)
 Frame = +2

Query: 326 MTAVRTCPGLYCGRTQLEDGLWSDCGACPRGFRTNVSSYCVPCEDEPTLYDWQYLGFMVL 505
           + +V  CPGLYCGRT LE+   S+CGAC RG+R N    C PCE + T +DW YLGFM +
Sbjct: 3   LRSVDKCPGLYCGRTVLENSSLSECGACLRGYRVNAQYVCSPCEKDLTSHDWLYLGFMTI 62

Query: 506 LPMVLHWFFIDM 541
           LP+++HWF ID+
Sbjct: 63  LPLIIHWFCIDL 74


>UniRef50_Q8SXK7 Cluster: RE11615p; n=2; Sophophora|Rep: RE11615p -
           Drosophila melanogaster (Fruit fly)
          Length = 304

 Score =  101 bits (243), Expect = 9e-21
 Identities = 40/70 (57%), Positives = 48/70 (68%)
 Frame = +2

Query: 332 AVRTCPGLYCGRTQLEDGLWSDCGACPRGFRTNVSSYCVPCEDEPTLYDWQYLGFMVLLP 511
           A+  CPG YCGR+ L +  WS CG CPRG R N S  C PC DE + Y W YLGFM +LP
Sbjct: 6   ALERCPGAYCGRSPLGNNSWSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLP 65

Query: 512 MVLHWFFIDM 541
           +++H FFIDM
Sbjct: 66  LMMHCFFIDM 75


>UniRef50_A7RVN2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 306

 Score = 85.0 bits (201), Expect = 1e-15
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 344 CPGLYCGRTQLEDGLWSDCGACPRGFRTNVSSYCVPCEDEPTLYDWQYLGFMVLLPMVLH 523
           CPG YCGR Q  +G +  C ACPRG+R+     CV C     L+DW YLGF++L  +VLH
Sbjct: 15  CPGQYCGRVQDRNGKFGKCQACPRGYRS-YGDLCVKCTKSLRLHDWLYLGFIILTVIVLH 73

Query: 524 WFFID 538
           WFFID
Sbjct: 74  WFFID 78


>UniRef50_Q9BMT9 Cluster: Seven transmembrane protein; n=3;
           Caenorhabditis|Rep: Seven transmembrane protein -
           Caenorhabditis elegans
          Length = 326

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)
 Frame = +2

Query: 392 SDCGACPRGFRTNVSSYCVPCEDEPTLYDWQYLGFMVLLPMVLHWFFI 535
           S CG C  G+R N  S C  C+     YDW YL F+ LLP++LH  FI
Sbjct: 45  SRCGPCSFGYRNNAMSICESCDTPLQPYDWMYLLFIALLPLLLHMQFI 92


>UniRef50_Q7R186 Cluster: GLP_447_21189_18670; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_447_21189_18670 - Giardia lamblia
           ATCC 50803
          Length = 839

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = +2

Query: 344 CPGLYCGRTQLED----GLWSDCGACPRGFRTNVSSYCVPCE 457
           C  L CG  +LE     G    CG C  G+  N S  C PCE
Sbjct: 255 CSLLKCGLKKLEHCTSCGTTGKCGVCFDGYAPNTSGICTPCE 296


>UniRef50_Q3AYB1 Cluster: Putative uncharacterized protein; n=2;
           Synechococcus|Rep: Putative uncharacterized protein -
           Synechococcus sp. (strain CC9902)
          Length = 296

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = -3

Query: 420 KPRGQAPQSLHSPSSNCVRPQYKPGQVLTAVILFYS*IDVKD*TSFQFIS 271
           KP  +    L++  S  V P+ KPG  L A I FY  I  K  TSFQ+ S
Sbjct: 225 KPTPRFKLELNNLLSTAVTPKLKPGNSLIAKIKFYPSIYSKLFTSFQYTS 274


>UniRef50_A5UW07 Cluster: TPR repeat-containing protein; n=2;
           Roseiflexus|Rep: TPR repeat-containing protein -
           Roseiflexus sp. RS-1
          Length = 497

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 326 MTAVRTCPGLYCGRTQLEDGLWSDCGACPRGF 421
           MT  R CP   CG T  +DG+   CG+  RGF
Sbjct: 1   MTLDRACPS--CGATLGDDGICVSCGSLSRGF 30


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,434,712
Number of Sequences: 1657284
Number of extensions: 9412799
Number of successful extensions: 19396
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19388
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)