Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_J03
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    24   3.1  
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    23   7.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.1  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   9.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   9.4  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 498 IKPKYCQSYNVGSSSQGTQ*LETFVLKPRGQAPQSLHSPSSNCVRPQYKPGQ 343
           I+ K+C     G   + TQ     +L  R +A QSL  PS+N ++   KP Q
Sbjct: 173 IEVKHCTLIANGDVDRATQ-----ILLHRQEAGQSLKGPSNNMLQAN-KPHQ 218


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 341 TCPGLYCGRTQLEDGLWSDCG 403
           TC   YCG   +    W D G
Sbjct: 45  TCRQSYCGPFSISRAYWMDAG 65


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 435  ETFVLKPRGQAPQSLHSPS 379
            ET +L P G AP S H  S
Sbjct: 1201 ETQLLHPPGTAPNSFHKSS 1219


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 426 VLKP-RGQAPQSLHSPSSNCVRP 361
           VLK  + +AP+SLH P  + V P
Sbjct: 12  VLKTYQDKAPRSLHGPGLSLVHP 34


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 438 LETFVLKPRGQAPQSLHSPSSNCVRPQYKPGQ 343
           L + +  P G     L +P S+  +PQ +P Q
Sbjct: 262 LSSVIGGPPGMVNNGLRAPPSSQQQPQQQPSQ 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,640
Number of Sequences: 2352
Number of extensions: 9959
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)