Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_J01
(426 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 193 1e-48
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 177 1e-43
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 158 5e-38
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 97 1e-19
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 96 3e-19
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 90 2e-17
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 89 3e-17
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 77 6e-17
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 75 8e-13
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 55 5e-07
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 51 9e-06
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 51 1e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 48 1e-04
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 35 0.81
UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing prot... 32 5.7
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 193 bits (471), Expect = 1e-48
Identities = 89/117 (76%), Positives = 95/117 (81%)
Frame = +1
Query: 10 PKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILI 189
PKG TYGKPKSHGVNQLKP R LQSIAEE NSYW+AQD+SYKYFEVILI
Sbjct: 76 PKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILI 135
Query: 190 DPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 360
D H AIRRDPKINWI VHKHRE+RGLTSAGKSSRG+GKG+R+SQT GGSRRAAW
Sbjct: 136 DTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAW 192
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 177 bits (430), Expect = 1e-43
Identities = 81/117 (69%), Positives = 89/117 (76%)
Frame = +1
Query: 10 PKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILI 189
PKGATYGKP HGVNQLK R+LQS+AEE NSYWV +DS+YK+FEVILI
Sbjct: 76 PKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILI 135
Query: 190 DPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 360
DP HKAIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 136 DPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 158 bits (383), Expect = 5e-38
Identities = 70/116 (60%), Positives = 85/116 (73%)
Frame = +1
Query: 13 KGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILID 192
KG TYGKPK+HGVN+LK ++ Q++AE NSYWVA+DS+YK++EV+LID
Sbjct: 77 KGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLID 136
Query: 193 PSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 360
P HKAIRR+P WI VHKHRE RGLTSAG+ SRGLGKG RFS T+GGS+ W
Sbjct: 137 PFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNW 192
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 97.1 bits (231), Expect = 1e-19
Identities = 49/98 (50%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
KP G + P ++LQ IAEE NSYWV +D YK+FEVI++DP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 211 RRDPKINWIVNAVHKHREMRGLTSAGKSSRGL---GKG 315
+ DPKI WI HK R RGLTSAGK RGL GKG
Sbjct: 141 KSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKG 178
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 95.9 bits (228), Expect = 3e-19
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
+ K GVN++ +NLQ IAEE NSYWV +D S K+FE IL+DP H AI
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142
Query: 211 RRDPKINWIVNAVHKHREMRGLTSAGKSSRGL---GKG 315
+ D +NWI + HK+R RG TSAG+ +RGL GKG
Sbjct: 143 QNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKG 180
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 90.2 bits (214), Expect = 2e-17
Identities = 44/108 (40%), Positives = 63/108 (58%)
Frame = +1
Query: 10 PKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILI 189
P+ + +PK GV P++ + IAEE SY+VA+D YKY+EVI++
Sbjct: 74 PRPNSGRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMV 133
Query: 190 DPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQT 333
D SH IR DP++ W+ ++V++ R RGLTSAG+ SRGL K T
Sbjct: 134 DYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGT 181
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 89.4 bits (212), Expect = 3e-17
Identities = 42/94 (44%), Positives = 55/94 (58%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
+PK GV P ++ + IAEE NSYWVA+D Y+++EVIL+DP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162
Query: 211 RRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGK 312
DP++ WI H+ R RG TSAG+ RGL K
Sbjct: 163 CSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLK 196
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 77.0 bits (181), Expect(2) = 6e-17
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 172 FEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL-GKGHRFSQTKGGSR 348
FE+IL+D +H AIR D +INW+ VHKH E+ GLTSAG RGL GKGH + + S
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSP 422
Query: 349 RAAW 360
RA W
Sbjct: 423 RATW 426
Score = 31.9 bits (69), Expect(2) = 6e-17
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 10 PKGATYGKPKSHGVNQLKPTRN 75
PKG Y KPK G+ QLK RN
Sbjct: 335 PKGIVYSKPKHQGITQLKFQRN 356
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 74.5 bits (175), Expect = 8e-13
Identities = 41/105 (39%), Positives = 57/105 (54%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
+PK GV + + NLQ +AE+ SYWV +D+ YK+FEV++IDPSH AI
Sbjct: 81 RPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPSHPAI 140
Query: 211 RRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGS 345
R DP W+V ++RE R + + R L + R Q GGS
Sbjct: 141 RNDPDYAWVVG--KEYREGRRIRRIRERQRKLIERLR-KQASGGS 182
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 55.2 bits (127), Expect = 5e-07
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
+PK GV + ++ + +AEE NSYWVA D Y+YFEVILID + I
Sbjct: 83 RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTI 142
Query: 211 RRDPKINWIV-NAVHKHREMRGLTSAGKSS 297
+ DP + I V + R +R L K +
Sbjct: 143 KNDPLYSGICGREVPRRRIIRRLRERQKKT 172
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 51.2 bits (117), Expect = 9e-06
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
+P + GV QLK RN + EE + +DS+YKY+E+IL+D +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKLAGLK------INEDSTYKYYEIILVDVAHSAI 55
Query: 211 RRDPKIN 231
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 50.8 bits (116), Expect = 1e-05
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 10 PKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILI 189
P+G +PK GV ++K +++ +A SY+V +D +Y +FEVIL
Sbjct: 73 PRGGR--RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILA 130
Query: 190 DPSHKAIRRDPKINWIVNA 246
DPSH + +DP++ V A
Sbjct: 131 DPSHPRVAKDPELRDRVGA 149
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 31 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEVILIDPSHKAI 210
+PK GV ++K N++++AE SY++ +D + +FEVIL DP H +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176
Query: 211 RRDPKI 228
+D ++
Sbjct: 177 AQDKEL 182
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 34.7 bits (76), Expect = 0.81
Identities = 27/103 (26%), Positives = 45/103 (43%)
Frame = -1
Query: 321 AMSLAETTRAFPCGRQTAHLAMFVYRIHDPIDLRITANSLXXXXXXXXXXXXXXXVLCYP 142
A+S A A C Q HL++ V DP+ +R++++S + P
Sbjct: 5 ALSKAMALAANRC--QPTHLSVLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNP 62
Query: 141 V*IKHXXXXXXXXXTLLSNRLQVASGFQLVDTMALGFAVGSSL 13
V I+ + LSNRL+ + QLV+T+ A+ +L
Sbjct: 63 VGIQDSQSSTMVPSSFLSNRLKASGKVQLVNTVVNRLAISCTL 105
>UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing protein
C19orf7; n=20; Theria|Rep: Zinc finger CCCH
domain-containing protein C19orf7 - Homo sapiens (Human)
Length = 1303
Score = 31.9 bits (69), Expect = 5.7
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 247 VHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSR 348
++++R + +S G+ SRG G+G+R ++GGSR
Sbjct: 224 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 257
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,928,359
Number of Sequences: 1657284
Number of extensions: 7628767
Number of successful extensions: 21764
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21754
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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