Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I24
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DQI6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_A7HN26 Cluster: Putative uncharacterized protein; n=1; ...    32   8.3  

>UniRef50_A2DQI6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1682

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
 Frame = -3

Query: 329 VIKKNASLDPSPHQIKFT*YLIDPLSRNQF------IYIVVISR*ITIYNNKNKYLHWIN 168
           ++ K   +  SP+ +K    L+ P S+N F      IY+ ++S  IT  NN+ +   ++N
Sbjct: 775 ILGKIFKIVSSPNSVKSFINLLLP-SKNNFLSIYYPIYLNLLSEIITTANNQPR--RYLN 831

Query: 167 EHSSNFRLFFNSSPFQI 117
             S ++ L FNS PFQ+
Sbjct: 832 FPSKSYLLEFNSIPFQV 848


>UniRef50_A7HN26 Cluster: Putative uncharacterized protein; n=1;
           Fervidobacterium nodosum Rt17-B1|Rep: Putative
           uncharacterized protein - Fervidobacterium nodosum
           Rt17-B1
          Length = 330

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 15/57 (26%), Positives = 33/57 (57%)
 Frame = -3

Query: 269 LIDPLSRNQFIYIVVISR*ITIYNNKNKYLHWINEHSSNFRLFFNSSPFQI*MLTKY 99
           L+DP SRN  +Y + + + +T Y++   Y+  + +  +++ +   +SP +I  +T Y
Sbjct: 52  LVDPFSRNMVVYNLELKQIVTAYSSIGSYVMNVYQSENDYIIVDRTSP-KISKITLY 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,779,278
Number of Sequences: 1657284
Number of extensions: 9963243
Number of successful extensions: 18015
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18013
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)