Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I24
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
 Frame = -3

Query: 203 YNNKNKYLHWINEHSSNF---RLFFN 135
           YNN N+  +W+N    N     +FFN
Sbjct: 48  YNNTNRKYYWLNVCCLNLSIVTIFFN 73


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 191 NKYLHWINEHSSNFR 147
           +K+L++IN+  +NFR
Sbjct: 404 HKWLNYINQFEANFR 418


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 365 KNFLHNHYSE 336
           KN L NHY E
Sbjct: 397 KNLLENHYEE 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,381
Number of Sequences: 336
Number of extensions: 2990
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)