Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I23
         (170 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   0.50 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   2.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   2.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   2.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    19   3.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 0.50
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 82  CLLDRCRSVSSGTYNIHTYIYN 147
           CL+ RC +     Y+I TY Y+
Sbjct: 386 CLMARCLNTLIFYYHISTYEYS 407


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 136 MYVCYTCRS 110
           M VC+TC+S
Sbjct: 958 MLVCFTCKS 966


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 136 MYVCYTCRS 110
           M VC+TC+S
Sbjct: 958 MLVCFTCKS 966


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 136 MYVCYTCRS 110
           M VC+TC+S
Sbjct: 958 MLVCFTCKS 966


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 136 MYVCYTCRS 110
           M VC+TC+S
Sbjct: 958 MLVCFTCKS 966


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 154 SNCYICMYVCYTCRSTPSDTCL 89
           +NC I MY+   C+      CL
Sbjct: 228 NNCEIDMYMRRKCQECRLKKCL 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,090
Number of Sequences: 336
Number of extensions: 340
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 36
effective length of database: 110,489
effective search space used:  2209780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)