Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I22
(562 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 84 6e-17
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 58 6e-09
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 55 4e-08
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 49 2e-06
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 48 4e-06
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 47 9e-06
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 47 1e-05
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 46 2e-05
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 46 2e-05
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 44 8e-05
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 42 3e-04
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 40 0.001
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 38 0.007
02_05_0881 + 32473208-32473575,32473742-32473826,32473991-324740... 31 0.83
01_01_0746 + 5772340-5773083 30 1.1
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 30 1.5
03_05_0644 + 26376544-26376929,26377013-26377193,26377314-26379017 29 2.5
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 29 3.4
04_04_1493 - 33977964-33978176,33978254-33978347,33978452-339788... 29 3.4
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 28 4.4
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 28 5.9
06_01_0211 + 1604799-1605037,1605420-1605575,1605972-1606043,160... 28 5.9
03_06_0473 - 34181212-34181430,34181512-34181735,34181812-341819... 28 5.9
03_05_0750 - 27383848-27383940,27384016-27384137,27384525-273845... 27 7.7
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462... 27 7.7
01_06_1021 - 33883594-33884583 27 7.7
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 84.2 bits (199), Expect = 6e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +3
Query: 249 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQNN 428
V ++ +NRPKALNAL +P+ V L A DAD +AA+VL G +AF +G D+ +
Sbjct: 23 VAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRGRAFCSGVDLTAAE-E 81
Query: 429 TYSDNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD 560
+ + K + C KPI+ A+ GFA+ G E+A+ CD
Sbjct: 82 VFKGDVKDPAADPVVQMERCRKPIVGAIAGFAVTAGFEIALACD 125
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 57.6 bits (133), Expect = 6e-09
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Frame = +3
Query: 243 KNVGLIQLNRPKALNALCKPLFV-ELGKAVNDFDADPTIAAIVLTGN-EKAFAAGADIKE 416
+ + I +NRP NA +PL V EL +A D D +I I+LTG ++F +G D
Sbjct: 79 EGIAKITINRPDRRNAF-RPLTVKELMRAFEDARDDSSIGVIILTGKGTQSFCSGGDQAL 137
Query: 417 MQNNTYSDNTKQGFLREWE---DISNCGKPIIAAVNGFALGGGCELAMLCD 560
+ Y D G L + I KP+IA V G+A+GGG L M+CD
Sbjct: 138 RDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCD 188
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 54.8 bits (126), Expect = 4e-08
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Frame = +3
Query: 258 IQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGN-EKAFAAGADIKEMQNNTY 434
++L RP+A NA+ + + L A+ AD T ++L + K F AGAD+KE + +
Sbjct: 57 MRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKERRLMSP 116
Query: 435 SD-----NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD 560
+ N+ + +E +S P IA V G A GGG ELA+ CD
Sbjct: 117 CEVREFVNSLRSTFLSFEALSI---PTIAIVEGAAFGGGLELALSCD 160
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +3
Query: 264 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQNNTYSDN 443
LNRPK LNAL + + ++ D + +++ G +AF AG D+ + + +D+
Sbjct: 154 LNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGDVAAVVRSINNDS 213
Query: 444 TKQG---FLREW---EDISNCGKPIIAAVNGFALGGGCELAM 551
K G F E+ I+ KP ++ + G +GGG +++
Sbjct: 214 WKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSI 255
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 48.4 bits (110), Expect = 4e-06
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Frame = +3
Query: 240 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEM 419
+ V +I ++ P +NAL + L + + + AIVLTG + F+ G DI
Sbjct: 12 RDGVAVITVSNPP-VNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGRFSGGFDINAF 70
Query: 420 QNNTYSD-------NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLC 557
D N ++ ++ + + KP +AA++G ALGGG EL M+C
Sbjct: 71 DKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAAIDGVALGGGLELVMVC 123
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 47.2 bits (107), Expect = 9e-06
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Frame = +3
Query: 249 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKE---M 419
V LI ++ P +NAL + L + + AIV+TG F+ G DI +
Sbjct: 16 VALITISNPP-VNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGGLDINTFGAI 74
Query: 420 QNNTYSDNTKQGFLR---EWEDISNCGKPIIAAVNGFALGGGCELAMLC 557
Q N ++ K ++ + GKP +AA+NG ALGGG E++M+C
Sbjct: 75 QRNK-AEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVC 122
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = +3
Query: 264 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQNNTYSDN 443
+NRPK LNAL + + ++ D + +++ G +AF AG D+ + + +D+
Sbjct: 48 MNRPKQLNALSSAMITGFLRCFTAYEEDEGVKLLIVKGKGRAFCAGGDVAAVVRSINNDS 107
Query: 444 TKQG---FLREW---EDISNCGKPIIAAVNGFALGGGCELAM 551
K F E+ I+ KP ++ + G +GGG +++
Sbjct: 108 WKYSAHFFRNEFLLNYIIATYNKPQVSLLTGIVMGGGAGVSI 149
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +3
Query: 264 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADI---KEMQNNTY 434
LNRP LNAL + L K ++ +P I +++ G+ +AF AG D+ ++ +
Sbjct: 61 LNRPGHLNALTTTMGARLNKFYMSWEDNPDIGFVMMKGSGRAFCAGGDVVRLHQLISEGK 120
Query: 435 SDNTKQGFLREWEDISNCG---KPIIAAVNGFALGGG 536
D K F + I G KP +A ++G +GGG
Sbjct: 121 LDECKDFFKTLYSFIYVLGTYLKPHVAILDGVTMGGG 157
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +3
Query: 264 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQNNTYSDN 443
LNRP+ LN + + L + + ++ D ++ G +AF+AG D+K D+
Sbjct: 30 LNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLVIFKGAGRAFSAGGDLKMFYEGKSDDS 89
Query: 444 TKQGFLREW---EDISNCGKPIIAAVNGFALGGGCEL 545
+ R + I K +A VNG +GGG +
Sbjct: 90 CLEVVYRMYWLCYHIHTYKKTAVALVNGLVMGGGAAM 126
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 GRFKKN-VGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVL-TGNEKAFAAGA 404
GR N V +I L+RPKALNA+ + + +++++ +P++ +++ + + +AF+AG
Sbjct: 12 GRVTPNGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGG 71
Query: 405 DIKEMQNN 428
D+K + N+
Sbjct: 72 DVKRLAND 79
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 354 IAAIVLTGNEKAFAAGADIKEMQN--NTYSDNTKQGFLRE---WEDISNCGKPIIAAVNG 518
+ AIV+TG F+ G DI + + K G++ + + KP +AA++G
Sbjct: 54 VKAIVVTGKGGKFSGGFDISSFGSVQGGKVEQPKVGYISIDIITDTLEAATKPSVAAIDG 113
Query: 519 FALGGGCELAMLC 557
ALGGG E+AM C
Sbjct: 114 LALGGGLEVAMAC 126
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Frame = +3
Query: 249 VGLIQLNRPKALNALCKPLFVE--LGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQ 422
V ++ + P +NAL P+ ++ K D D + AIVLTG F G DI
Sbjct: 16 VAVVTICNPP-VNAL-HPIIIQGLKEKYAEAMDRDD-VKAIVLTGAGGKFCGGFDI---- 68
Query: 423 NNTYSDNTKQGFLREWEDIS--------NCG-KPIIAAVNGFALGGGCELAMLC 557
N +++ K G + D+S G KP +AA+ G ALGGG EL M C
Sbjct: 69 -NVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGC 121
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 37.5 bits (83), Expect = 0.007
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +3
Query: 258 IQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKA-FAAGADIKEMQNNTY 434
++L RP+ NA+ L V +AD T+ +++T + F AGAD+K +
Sbjct: 50 LRLERPEVKNAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKALSI--- 106
Query: 435 SDNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD 560
P IA + G ALGGG ELA+ CD
Sbjct: 107 --------------------PTIAVIEGAALGGGLELALSCD 128
>02_05_0881 +
32473208-32473575,32473742-32473826,32473991-32474053,
32474199-32474241,32474737-32474796,32475001-32475301,
32475554-32475668,32476168-32476272,32476338-32476517
Length = 439
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 362 SGNGWICI-EVVDCFTELHKQWFAESVQ 282
SG GWICI + CF EL+ F +VQ
Sbjct: 303 SGGGWICIVRFIGCFDELNHYLFFVNVQ 330
>01_01_0746 + 5772340-5773083
Length = 247
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 360 AIVLTGNEKAFAAGADIKEMQNNTYSDNTKQG--FLREWEDISNCGKPIIAAVNGFALGG 533
A+V+ G K F+ G D+ + + G F D+ P +AAV G A
Sbjct: 54 ALVIAGEGKYFSNGFDLDWARTVPAELHASMGGAFRGLVADLLALPVPTVAAVTGHAAAA 113
Query: 534 GCELAMLCD 560
GC LA+ D
Sbjct: 114 GCALALAHD 122
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 318 GKAVNDFDADPTIAAIVLTGNEKAFA-AGADI--KEMQNNTYSDNTKQGFLREWEDISNC 488
G +D + T +A +LTG++ GAD +++QN N +LREW N
Sbjct: 260 GNTPSDINGCWTGSATILTGDQPVIIYTGADTEKRQVQNIVLPKNRSDPYLREWTKPKN- 318
Query: 489 GKPIIAAV 512
P+I V
Sbjct: 319 -NPLIEPV 325
>03_05_0644 + 26376544-26376929,26377013-26377193,26377314-26379017
Length = 756
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 310 WSSVKQSTTSMQIQPLPLLY*LVTRRLSQRVLILRKCRIIHTVTIQNKD---SYASGRTS 480
W+ V+Q TS ++Q L T RLS C + TV +QN D Y S S
Sbjct: 72 WNGVQQDVTS-RLQRKLLYEVAATVRLSGAAATPSPCEVRATVAVQNTDGRQQYISVAKS 130
Query: 481 PTV 489
P V
Sbjct: 131 PAV 133
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 510 RQR*WAS-HSWRCPPTRVRILVLYCH 436
+QR + S + W CPP + +LYCH
Sbjct: 1106 KQRGFTSCYIWACPPVKGEDYILYCH 1131
>04_04_1493 -
33977964-33978176,33978254-33978347,33978452-33978855,
33978944-33979818,33980212-33980293
Length = 555
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 357 AAIVLTGNEKAFA-AGADIK--EMQNNTYSDNTKQGFLREWEDISNCGKPIIA 506
+A VL G AF G D ++QN +++ N LREWE S C PIIA
Sbjct: 89 SATVLLGGRPAFLYTGRDAGGVQVQNVSFAKNPLDPLLREWEKPS-C-NPIIA 139
>02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 510 RQR*WAS-HSWRCPPTRVRILVLYCH 436
+QR + S + W CPP + +LYCH
Sbjct: 1207 KQRGFTSCYIWACPPLKGEDYILYCH 1232
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 452 LFCIVTVCIILHFLNISTRCESLL 381
++ +VTVCI +LN+ TR S+L
Sbjct: 429 IYIVVTVCIGTIYLNVGTRYSSIL 452
>06_01_0211 +
1604799-1605037,1605420-1605575,1605972-1606043,
1606325-1606396,1606608-1606679,1606777-1606848,
1606936-1607007,1607092-1607160,1607278-1607349,
1607630-1607701,1607786-1607857,1607940-1608011,
1608100-1608171,1608286-1608357,1608449-1608520,
1608633-1608704,1608801-1608872,1608962-1609033,
1609120-1609191,1609283-1609353,1609439-1609570,
1609676-1610014,1610097-1610467,1610599-1610928,
1611115-1611150
Length = 964
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 295 ANHCLWSSVKQSTTSMQIQPLPL-LY*LVTRRLSQRVLILRKCRIIHTVTIQNKDSYASG 471
A+HC W V S + L L + + + +R+ ++R + + N + G
Sbjct: 60 ADHCAWRGVTCDNASFAVLALSLDISEAILFVMLKRIFVMRVFPCVKNRNLSNLN--LGG 117
Query: 472 RTSPTVGSPSSLPSTDL 522
SP +G +L DL
Sbjct: 118 EISPAIGELKNLQFVDL 134
>03_06_0473 -
34181212-34181430,34181512-34181735,34181812-34181973,
34182071-34182167
Length = 233
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +3
Query: 231 GRFKKNVGL-IQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGAD 407
G F K + + L A+ AL K GK+ ++ AD V+TG+ + F
Sbjct: 41 GNFIKFTAIGVYLEEGAAVPALAKKW---AGKSADELAADAAFFRDVVTGDFEKFTRVTM 97
Query: 408 IKEMQNNTYSDNTKQGFLREWE 473
I + YSD + + W+
Sbjct: 98 ILPLTGEQYSDKVTENCVAAWK 119
>03_05_0750 -
27383848-27383940,27384016-27384137,27384525-27384578,
27384682-27384783,27386838-27387087
Length = 206
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 407 ISTRCESLLVTSQYNSGNGW 348
IS RC+++ NSGNGW
Sbjct: 30 ISRRCDAVSAVGGANSGNGW 49
>02_05_0410 +
28744716-28744841,28745361-28745965,28746151-28746270,
28746597-28746737,28748626-28749370
Length = 578
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 406 SAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSA 278
SA A A ++PV AAMVG++S+ AL +T ++ A +A
Sbjct: 429 SAAATTAATVPVKEEAAMVGTSSE---ALAKTTQKSMEDAAAA 468
>01_06_1021 - 33883594-33884583
Length = 329
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -1
Query: 442 LSLYVLFCISLISAPAAKAFSLPVSTIAAMVGSASKSLTALP 317
L L +LF +SL+S AA F++ S AA S + SL ALP
Sbjct: 84 LYLILLFTLSLLSTAAA-VFTV-ASLYAAKPASIASSLAALP 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,320,277
Number of Sequences: 37544
Number of extensions: 305548
Number of successful extensions: 889
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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